RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	TLN1	Q9Y490	2541 aa	Known RBP	18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	TPR	P12270	2363 aa	Known RBP	18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	LINC01559	Q495D7	138 aa		18.1	■□□□□ 0.49
GSDMD-208	ENST00000528475	SLC50A1	Q9BRV3	221 aa		18.1	■□□□□ 0.49
GSDMD-208	ENST00000528475	FGF6	P10767	208 aa		18.1	■□□□□ 0.49
GSDMD-208	ENST00000528475	RNF185	Q96GF1	192 aa		18.1	■□□□□ 0.49
GSDMD-208	ENST00000528475	VAMP3	Q15836	100 aa		18.09	■□□□□ 0.49
GSDMD-208	ENST00000528475	GOSR1	O95249	250 aa		18.08	■□□□□ 0.49
GSDMD-208	ENST00000528475	ORM1	P02763	201 aa		18.08	■□□□□ 0.49
GSDMD-208	ENST00000528475	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		18.08	■□□□□ 0.49
GSDMD-208	ENST00000528475	ABCA4	P78363	2273 aa		18.08	■□□□□ 0.48
GSDMD-208	ENST00000528475	ANKRD39	Q53RE8	183 aa		18.08	■□□□□ 0.48
GSDMD-208	ENST00000528475	IFI27L1	Q96BM0	104 aa		18.08	■□□□□ 0.48
GSDMD-208	ENST00000528475	SMKR1	H3BMG3	65 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	ATP6V0E1	O15342	81 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	OR4C5	Q8NGB2	326 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	IGF2R	P11717	2491 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	CLEC3B	P05452	202 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	CACNG7	P62955	275 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	ECSCR	Q19T08	205 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	MAP1LC3A	Q9H492	121 aa		18.07	■□□□□ 0.48
GSDMD-208	ENST00000528475	CLPSL1	A2RUU4	121 aa		18.06	■□□□□ 0.48
GSDMD-208	ENST00000528475	PRAC2	D3DTV9	90 aa		18.06	■□□□□ 0.48
GSDMD-208	ENST00000528475	ERCC8	Q13216	396 aa		18.06	■□□□□ 0.48
GSDMD-208	ENST00000528475	IGHV3OR16-8	A0A075B7F1	116 aa		18.05	■□□□□ 0.48
GSDMD-208	ENST00000528475	IGHV3-35	A0A0C4DH35	117 aa		18.05	■□□□□ 0.48
GSDMD-208	ENST00000528475	SEC11A	P67812	179 aa		18.05	■□□□□ 0.48
GSDMD-208	ENST00000528475	BOD1L2	Q8IYS8	172 aa		18.05	■□□□□ 0.48
GSDMD-208	ENST00000528475	MRPL53	Q96EL3	112 aa	Known RBP	18.05	■□□□□ 0.48
GSDMD-208	ENST00000528475	CCDC140	Q96MF4	163 aa		18.05	■□□□□ 0.48
GSDMD-208	ENST00000528475		A0A1W2PPR1	153 aa		18.04	■□□□□ 0.48
GSDMD-208	ENST00000528475	NDUFS7	O75251	213 aa		18.04	■□□□□ 0.48
GSDMD-208	ENST00000528475	TMEM97	Q5BJF2	176 aa		18.04	■□□□□ 0.48
GSDMD-208	ENST00000528475	MSRB1	Q9NZV6	116 aa		18.04	■□□□□ 0.48
GSDMD-208	ENST00000528475	SPTBN4	Q9H254	2564 aa		18.04	■□□□□ 0.48
GSDMD-208	ENST00000528475	RNASE8	Q8TDE3	154 aa	Known RBP	18.03	■□□□□ 0.48
GSDMD-208	ENST00000528475	SIVA1	O15304	175 aa		18.03	■□□□□ 0.48
GSDMD-208	ENST00000528475	SAA4	P35542	130 aa		18.03	■□□□□ 0.48
GSDMD-208	ENST00000528475	FOXE3	Q13461	319 aa		18.03	■□□□□ 0.48
GSDMD-208	ENST00000528475	PRSS57	Q6UWY2	283 aa		18.03	■□□□□ 0.48
GSDMD-208	ENST00000528475	EEF1AKMT3	Q96AZ1	226 aa		18.03	■□□□□ 0.48
GSDMD-208	ENST00000528475	NXT2	Q9NPJ8	142 aa	Known RBP	18.03	■□□□□ 0.48
GSDMD-208	ENST00000528475	IL17REL	Q6ZVW7	336 aa		18.02	■□□□□ 0.48
GSDMD-208	ENST00000528475	OR9G4	Q8NGQ1	327 aa		18.02	■□□□□ 0.48
GSDMD-208	ENST00000528475	HIF1AN	Q9NWT6	349 aa		18.02	■□□□□ 0.48
GSDMD-208	ENST00000528475	TRBV7-1	A0A0A6YYK4	115 aa		18.02	■□□□□ 0.47
GSDMD-208	ENST00000528475	FXYD7	P58549	80 aa		18.02	■□□□□ 0.47
GSDMD-208	ENST00000528475	RNF182	Q8N6D2	247 aa		18.02	■□□□□ 0.47
GSDMD-208	ENST00000528475	PIFO	Q8TCI5	191 aa		18.02	■□□□□ 0.47
GSDMD-208	ENST00000528475	CENPVL3	A0A0U1RRI6	287 aa		18.01	■□□□□ 0.47
GSDMD-208	ENST00000528475	SMAD7	O15105	426 aa	Known RBP	18.01	■□□□□ 0.47
GSDMD-208	ENST00000528475	EFNA4	P52798	201 aa		18.01	■□□□□ 0.47
GSDMD-208	ENST00000528475	PSMG4	Q5JS54	123 aa		18.01	■□□□□ 0.47
GSDMD-208	ENST00000528475	CLEC19A	Q6UXS0	136 aa		18.01	■□□□□ 0.47
GSDMD-208	ENST00000528475	PEF1	Q9UBV8	284 aa	Known RBP	18.01	■□□□□ 0.47
GSDMD-208	ENST00000528475	CBY3	A6NI87	242 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	FCER1G	P30273	86 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	ATP6V0B	Q99437	205 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	AGPAT4-IT1	Q9H0P7	198 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	PRORY	Q9H606	182 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475		U3KQE9	123 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	TRAV8-2	A0A0B4J237	113 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	SNAI2	O43623	268 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	TNFRSF6B	O95407	300 aa		18	■□□□□ 0.47
GSDMD-208	ENST00000528475	IGKV3D-20	A0A0C4DH25	116 aa		17.99	■□□□□ 0.47
GSDMD-208	ENST00000528475	LMO4	P61968	165 aa		17.99	■□□□□ 0.47
GSDMD-208	ENST00000528475	RBX1	P62877	108 aa		17.99	■□□□□ 0.47
GSDMD-208	ENST00000528475	METTL26	Q96S19	204 aa		17.99	■□□□□ 0.47
GSDMD-208	ENST00000528475		G3V318	75 aa		17.98	■□□□□ 0.47
GSDMD-208	ENST00000528475	AMMECR1L	Q6DCA0	310 aa		17.98	■□□□□ 0.47
GSDMD-208	ENST00000528475	ERAS	Q7Z444	233 aa		17.98	■□□□□ 0.47
GSDMD-208	ENST00000528475	DCHS2	Q6V1P9	2916 aa		17.98	■□□□□ 0.47
GSDMD-208	ENST00000528475	C9orf47	Q6ZRZ4	202 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475		A1L4Q6	167 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	C7orf71	A4D174	169 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	NPFF	O15130	113 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	GAS8-AS1	O95177	125 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	HSD52	Q0P140	79 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	TMEM78	Q5T7P6	136 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	C5orf56	Q8N8D9	126 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	OR4X2	Q8NGF9	303 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	ZMAT4	Q9H898	229 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	C11orf21	Q9P2W6	132 aa		17.97	■□□□□ 0.47
GSDMD-208	ENST00000528475	TACC2	O95359	2948 aa		17.96	■□□□□ 0.47
GSDMD-208	ENST00000528475	IGHV3-66	A0A0C4DH42	116 aa		17.96	■□□□□ 0.47
GSDMD-208	ENST00000528475	LINC01548	A6NM66	108 aa		17.96	■□□□□ 0.47
GSDMD-208	ENST00000528475	LEP	P41159	167 aa		17.96	■□□□□ 0.47
GSDMD-208	ENST00000528475	LY6D	Q14210	128 aa		17.96	■□□□□ 0.47
GSDMD-208	ENST00000528475	C8orf86	Q6ZUL3	223 aa		17.96	■□□□□ 0.47
GSDMD-208	ENST00000528475	PRSS47	A8MTI9	375 aa		17.95	■□□□□ 0.46
GSDMD-208	ENST00000528475		Q8N8P6	123 aa		17.95	■□□□□ 0.46
GSDMD-208	ENST00000528475	UBTD1	Q9HAC8	227 aa		17.95	■□□□□ 0.46
GSDMD-208	ENST00000528475	DKK2	Q9UBU2	259 aa		17.95	■□□□□ 0.46
GSDMD-208	ENST00000528475	LRBA	P50851	2863 aa		17.95	■□□□□ 0.46
GSDMD-208	ENST00000528475	IGLV2-18	A0A075B6J9	118 aa		17.94	■□□□□ 0.46
GSDMD-208	ENST00000528475	TRAV8-6	A0A0B4J262	113 aa		17.94	■□□□□ 0.46
GSDMD-208	ENST00000528475		A6NDN8	102 aa		17.94	■□□□□ 0.46
GSDMD-208	ENST00000528475	ADAMTSL5	Q6ZMM2	481 aa		17.94	■□□□□ 0.46
GSDMD-208	ENST00000528475	IGHV4-4	A0A075B6R2	117 aa		17.94	■□□□□ 0.46
GSDMD-208	ENST00000528475	IGHV7-4-1	A0A0J9YVY3	117 aa		17.94	■□□□□ 0.46

Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms