RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
SNF8-214ENST00000515174 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 TRBV7-9A0A0J9YWB2 115 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 DNAJC9-AS1A6NH13 148 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 A8MWP6 167 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 TMEM95Q3KNT9 176 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 C9orf47Q6ZRZ4 202 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 C8orf86Q6ZUL3 223 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 GBGT1Q8N5D6 347 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 NUP35Q8NFH5 326 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 CUBNO60494 3623 aa7.77□□□□□ -1.17
SNF8-214ENST00000515174 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 SOCS3O14543 225 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 HLA-DQA1P01909 254 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 S100A8P05109 93 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 RPLP1P05386 114 aaKnown RBP7.76□□□□□ -1.17
SNF8-214ENST00000515174 CT45A10P0DMU9 189 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 CRIP1P50238 77 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 FABP9Q0Z7S8 132 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 Q6AWC8 147 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 ZC2HC1AQ96GY0 325 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 SGK494Q96LW2 274 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 RHPN1-AS1Q9BWJ2 59 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 C16orf95Q9H693 158 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 ESM1Q9NQ30 184 aa7.76□□□□□ -1.17
SNF8-214ENST00000515174 A0A1B0GXF2 115 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 HIGD1CA8MV81 97 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 OVOL1O14753 267 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 ZNF207O43670 478 aaKnown RBP7.75□□□□□ -1.17
SNF8-214ENST00000515174 TCF21O43680 179 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
SNF8-214ENST00000515174 NDUFA6P56556 154 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 RPS20P60866 119 aaKnown RBP7.75□□□□□ -1.17
SNF8-214ENST00000515174 PRR27Q6MZM9 219 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 TMEM136Q6ZRR5 245 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 RBPMS2Q6ZRY4 209 aaKnown RBP7.75□□□□□ -1.17
SNF8-214ENST00000515174 LCNL1Q6ZST4 164 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 KLHDC1Q8N7A1 406 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 LINC00477Q96M19 166 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 NEU1Q99519 415 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 NDFIP1Q9BT67 221 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 NRN1Q9NPD7 142 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 ANK2Q01484 3957 aa7.75□□□□□ -1.17
SNF8-214ENST00000515174 IGHV3-66A0A0C4DH42 116 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 A0A1B0GW15 77 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 XKRY2A2RUG3 117 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 FABP5P3A8MUU1 101 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 ZNF138P52744 262 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 Q0VG73 95 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 KLF5Q13887 457 aaPredicted RBP7.74□□□□□ -1.17
SNF8-214ENST00000515174 SMUG1Q53HV7 270 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 TM4SF20Q53R12 229 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 FAM162BQ5T6X4 162 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 C10orf99Q6UWK7 81 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 Q6ZSV7 163 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 GATD1Q8NB37 220 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 OR2D3Q8NGH3 330 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 C16orf92Q96LL3 132 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 ASCL2Q99929 193 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 VGLL1Q99990 258 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
SNF8-214ENST00000515174 IGHV3OR16-13A0A075B7E8 117 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 IGKV2-40A0A087WW87 121 aaPredicted RBP7.73□□□□□ -1.17
SNF8-214ENST00000515174 IGHV3-49A0A0A0MS15 119 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 IGHV3-74A0A0B4J1X5 117 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 TMEM213A2RRL7 107 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 FAM181BA6NEQ2 426 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 ZNF705FA8MVS1 300 aaPredicted RBP7.73□□□□□ -1.17
SNF8-214ENST00000515174 SNURFLB1AK76 121 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 CA1P00915 261 aaPredicted RBP7.73□□□□□ -1.17
SNF8-214ENST00000515174 IGKV2D-40P01614 121 aaPredicted RBP7.73□□□□□ -1.17
SNF8-214ENST00000515174 HLA-DMBP28068 263 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 HIST1H1AQ02539 215 aaPredicted RBP7.73□□□□□ -1.17
SNF8-214ENST00000515174 ZNF418Q8TF45 676 aaPredicted RBP7.73□□□□□ -1.17
SNF8-214ENST00000515174 C4orf3Q8WVX3 66 aa7.73□□□□□ -1.17
SNF8-214ENST00000515174 MRPL18Q9H0U6 180 aaKnown RBP7.73□□□□□ -1.17
SNF8-214ENST00000515174 TRAV2A0A0B4J234 112 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 PRAC2D3DTV9 90 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 ESDP10768 282 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 CBLN1P23435 193 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 ID1P41134 155 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 HILS1P60008 231 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 TMEM78Q5T7P6 136 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 IGFL4Q6B9Z1 124 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 C8orf49Q96NF6 230 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 JMJD8Q96S16 334 aa7.72□□□□□ -1.17
SNF8-214ENST00000515174 IGHV4OR15-8A0A075B7B6 117 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 A0A087WW49 117 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 TMEM189A5PLL7 270 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 LINC01619G3V211 115 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 SH2D1AO60880 128 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 NDUFA7O95182 113 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 HOXD3P31249 432 aaPredicted RBP7.71□□□□□ -1.18
SNF8-214ENST00000515174 TCL1AP56279 114 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 HBBP68871 147 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
SNF8-214ENST00000515174 TCTEX1D4Q5JR98 221 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms