RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 WDFY4Q6ZS81 3184 aa11.8□□□□□ -0.52
USP38-202ENST00000510377 DPM2O94777 84 aa11.8□□□□□ -0.52
USP38-202ENST00000510377 CDKN1BP46527 198 aa11.8□□□□□ -0.52
USP38-202ENST00000510377 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.8□□□□□ -0.52
USP38-202ENST00000510377 LOXL1Q08397 574 aaPredicted RBP11.79□□□□□ -0.52
USP38-202ENST00000510377 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 A0A1B0GWB2 263 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 K7ERJ3 54 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 IGKV1-17P01599 117 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 COX6B1P14854 86 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 ABCA2Q9BZC7 2435 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 APOMO95445 188 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 NEU4Q8WWR8 484 aaPredicted RBP11.79□□□□□ -0.52
USP38-202ENST00000510377 SCGB3A1Q96QR1 104 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 SCRT2Q9NQ03 307 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 IGLV2-23P01705 113 aa11.79□□□□□ -0.52
USP38-202ENST00000510377 NAV2Q8IVL1 2488 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 K7EP13 123 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 PSMB2P49721 201 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 ZNF418Q8TF45 676 aaPredicted RBP11.78□□□□□ -0.52
USP38-202ENST00000510377 TNFRSF14Q92956 283 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 VGLL1Q99990 258 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 VKORC1Q9BQB6 163 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 ATP5LO75964 103 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 C5orf64Q2M2E5 130 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 MSRB1Q9NZV6 116 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 NDPQ00604 133 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
USP38-202ENST00000510377 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
USP38-202ENST00000510377 CIDEAO60543 219 aa11.77□□□□□ -0.52
USP38-202ENST00000510377 GATA1P15976 413 aaPredicted RBP11.77□□□□□ -0.52
USP38-202ENST00000510377 C15orf32Q32M92 178 aa11.77□□□□□ -0.52
USP38-202ENST00000510377 SAMD13Q5VXD3 122 aa11.77□□□□□ -0.52
USP38-202ENST00000510377 RUSC1-AS1Q66K80 236 aa11.77□□□□□ -0.52
USP38-202ENST00000510377 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.52
USP38-202ENST00000510377 ZNF479Q96JC4 524 aa11.77□□□□□ -0.52
USP38-202ENST00000510377 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.52
USP38-202ENST00000510377 TRAV40A0A0B4J280 105 aa11.77□□□□□ -0.53
USP38-202ENST00000510377 C9orf118A6NHY6 69 aa11.77□□□□□ -0.53
USP38-202ENST00000510377 IGKV3-20P01619 116 aa11.77□□□□□ -0.53
USP38-202ENST00000510377 LINC00311Q8N616 119 aa11.77□□□□□ -0.53
USP38-202ENST00000510377 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
USP38-202ENST00000510377 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.76□□□□□ -0.53
USP38-202ENST00000510377 FAM74A4Q5TZK3 123 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 WFDC12Q8WWY7 111 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 CHAC1Q9BUX1 264 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 FRYQ5TBA9 3013 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 TRAV26-2A0A0B4J265 109 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 Q5PR19 223 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 JMJD8Q96S16 334 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 C19orf71A6NCJ1 209 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 H3BRN7 92 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 RBX1P62877 108 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 LY6EQ16553 131 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 LINC01545Q5VT33 79 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 OR10J6PQ8NGY7 276 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 PRR25Q96S07 402 aa11.76□□□□□ -0.53
USP38-202ENST00000510377 SPRY2O43597 315 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 LRRK2Q5S007 2527 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 IGHV3-11P01762 117 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 PPBPP02775 128 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 EGR2P11161 476 aaPredicted RBP11.75□□□□□ -0.53
USP38-202ENST00000510377 GNLYP22749 145 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 Q71RC1 249 aaPredicted RBP11.75□□□□□ -0.53
USP38-202ENST00000510377 LYPD1Q8N2G4 141 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 H3BRM9 83 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 PF4V1P10720 104 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 CYSLTR1Q9Y271 337 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 NDUFS7O75251 213 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 TMEM14CQ9P0S9 112 aa11.75□□□□□ -0.53
USP38-202ENST00000510377 TLN2Q9Y4G6 2542 aa11.74□□□□□ -0.53
USP38-202ENST00000510377 TMEM8BA6NDV4 472 aa11.74□□□□□ -0.53
USP38-202ENST00000510377 PAX2Q02962 417 aa11.74□□□□□ -0.53
USP38-202ENST00000510377 MLST8Q9BVC4 326 aa11.74□□□□□ -0.53
USP38-202ENST00000510377 HERVK_113P61574 105 aa11.74□□□□□ -0.53
USP38-202ENST00000510377 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
USP38-202ENST00000510377 PSMB11A5LHX3 300 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 EMP1P54849 157 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 LGALS9BQ3B8N2 356 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 TMEM170BQ5T4T1 132 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 IL17RELQ6ZVW7 336 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 ZNF462Q96JM2 2506 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 K7EIM0 57 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 ADAMTSL5Q6ZMM2 481 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 URB1-AS1Q96HZ7 61 aa11.73□□□□□ -0.53
USP38-202ENST00000510377 I3L2K1 104 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 ATP5G2Q06055 141 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 AMTNQ6UX39 209 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 TMEM219Q86XT9 240 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 EEF1AKMT3Q96AZ1 226 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 ADAMTS20P59510 1910 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 TRGV3P03979 118 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 SRD5A1P18405 259 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 KHDC1LQ5JSQ8 128 aa11.72□□□□□ -0.53
USP38-202ENST00000510377 VMO1Q7Z5L0 202 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms