RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 AKR1C3P42330 323 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 POLR2HP52434 150 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 SARNPP82979 210 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 EIF3IQ13347 325 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 C3orf56Q8N813 242 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ZNF714Q96N38 554 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 CCDC115Q96NT0 180 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 C6orf62Q9GZU0 229 aaPredicted RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 TCEAL2Q9H3H9 227 aaPredicted RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 C14orf132Q9NPU4 83 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 TMEM106BQ9NUM4 274 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 MED31Q9Y3C7 131 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ROCK2O75116 1388 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 SCN7AQ01118 1682 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 MYH11P35749 1972 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ARHGAP32A7KAX9 2087 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 COL6A3P12111 3177 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 RANBP2P49792 3224 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 TRAV1-1A0A0B4J248 108 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ODAMA1E959 279 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ZNF705BP0CI00 300 aaPredicted RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 S100A11P31949 105 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 RPL35P42766 123 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 GTF2A1P52655 376 aaPredicted RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ARPP19P56211 112 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 RPS28P62857 69 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 DENND4CQ5VZ89 1909 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 RPS19BP1Q86WX3 136 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 C9orf163Q8N9P6 203 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 LINC00301Q8NCQ3 95 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 OR5D16Q8NGK9 328 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 SPACA4Q8TDM5 124 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 ZDBF2Q9HCK1 2354 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 CHD8Q9HCK8 2581 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 NAT8BQ9UHF3 227 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 MYH2Q9UKX2 1941 aa1.83□□□□□ -2.12
TRAPPC13-208ENST00000505553 SPTBN5Q9NRC6 3674 aaKnown RBP1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 BDP1A6H8Y1 2624 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 MALRD1Q5VYJ5 2156 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 MYH3P11055 1940 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 UNC80Q8N2C7 3258 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 GABARAPH6UMI1 98 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 KPNA4O00629 521 aaPredicted RBP1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 UBL3O95164 117 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 OR10J4P0C629 311 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 ASAH2BP0C7U1 165 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 NDUFA6P56556 154 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 HBBP68871 147 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 ZNF846Q147U1 533 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 MSMO1Q15800 293 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 PHF5AQ7RTV0 110 aaKnown RBP1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 ST6GALNAC3Q8NDV1 305 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 RNASE11Q8TAA1 199 aaKnown RBP1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 CARD19Q96LW7 228 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 CACYBPQ9HB71 228 aaKnown RBP1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 OTORQ9NRC9 128 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 LY96Q9Y6Y9 160 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 NCOR1O75376 2440 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 CACNA1BQ00975 2339 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 BRCA2P51587 3418 aa1.82□□□□□ -2.12
TRAPPC13-208ENST00000505553 BAHCC1Q9P281 2608 aa1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 TRAV3A0A0B4J244 114 aa1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 H7BYZ3 331 aa1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 J3KT08 172 aa1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 RPL7P18124 248 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 GPX2P18283 190 aa1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 Q1T7F1 81 aa1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 RNF11Q9Y3C5 154 aa1.81□□□□□ -2.12
TRAPPC13-208ENST00000505553 VCANP13611 3396 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 SDK2Q58EX2 2172 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 LAMA3Q16787 3333 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 OBSL1O75147 1896 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 MKI67P46013 3256 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 RTL9Q8NET4 1388 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 IBTKQ9P2D0 1353 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 KDM3BQ7LBC6 1761 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 EPG5Q9HCE0 2579 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 OVOL1O14753 267 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 DEGS1O15121 323 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 LYZL6O75951 148 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 CRPP02741 224 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 SDC2P34741 201 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 S100A12P80511 92 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 SMCO1Q147U7 214 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 RNASE10Q5GAN6 216 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 PATE2Q6UY27 113 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 OR4K15Q8NH41 348 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 ZNF418Q8TF45 676 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 MCEEQ96PE7 176 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 LXNQ9BS40 222 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 OR5AC2Q9NZP5 309 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 TRAPPC2LQ9UL33 140 aa1.8□□□□□ -2.12
TRAPPC13-208ENST00000505553 COL1A1P02452 1464 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 BORCS7-ASMTA0A0B4J1R7 106 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 A0A1B0GX51 115 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 C17orf112F2Z3M2 114 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 RER1O15258 196 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 DHFRP00374 187 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 GPX1P07203 203 aa1.79□□□□□ -2.12
TRAPPC13-208ENST00000505553 FABP2P12104 132 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms