RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 IFNA1P01562 189 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 IFNA7P01567 189 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 TCRAP04437 139 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 CRISP2P16562 243 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 DEFB1P60022 68 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 NEU1Q99519 415 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 ATG101Q9BSB4 218 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 TMPRSS5Q9H3S3 457 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 ZNF492Q9P255 531 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 BOLA1Q9Y3E2 137 aa9.22□□□□□ -0.93
SPTLC1-204ENST00000469778 GGTLC3B5MD39 225 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 S100A9P06702 114 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 ZNF705DP0CH99 300 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 ZNF705BP0CI00 300 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 CT45A10P0DMU9 189 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 DEFB135Q30KP9 77 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 TEX261Q6UWH6 196 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 ALKAL2Q6UX46 152 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 ZNF705AQ6ZN79 300 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 CCDC28AQ8IWP9 274 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 FAM19A4Q96LR4 140 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 RARRES2Q99969 163 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 SLC35B3Q9H1N7 401 aa9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 PRKDCP78527 4128 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-204ENST00000469778 AGRNO00468 2067 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 MIFP14174 115 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 UBE2G2P60604 165 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 SAPCD1Q5SSQ6 148 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 CST9LP1Q5W188 147 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 OR11H2Q8NH07 326 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 LYPD6BQ8NI32 183 aa9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 YTHDF2Q9Y5A9 579 aaKnown RBP9.2□□□□□ -0.94
SPTLC1-204ENST00000469778 IGKV2-40A0A087WW87 121 aaPredicted RBP9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 KLLNB2CW77 178 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 PAGE4O60829 102 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 IGKV2D-40P01614 121 aaPredicted RBP9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 SPINK13Q1W4C9 94 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 ZNF680Q8NEM1 530 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 VGLL1Q99990 258 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 NDFIP1Q9BT67 221 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 TMEM208Q9BTX3 173 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
SPTLC1-204ENST00000469778 TRBV6-1A0A0K0K1D8 114 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 H7BYZ3 331 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 CRXO43186 299 aaPredicted RBP9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 NDUFS6O75380 124 aaKnown RBP9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 GPX1P07203 203 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 ERCC8Q13216 396 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 IL17DQ8TAD2 202 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 GNG13Q9P2W3 67 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 KLF12Q9Y4X4 402 aa9.18□□□□□ -0.94
SPTLC1-204ENST00000469778 C11orf94C9JXX5 98 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 M0R2Z0 102 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 PEX7O00628 323 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 PDE6DO43924 150 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 TAS2R60P59551 318 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 CCL20P78556 96 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 FLI1Q01543 452 aaPredicted RBP9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 FMC1Q96HJ9 113 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 PYGO2Q9BRQ0 406 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 NIPSNAP3BQ9BS92 247 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 C11orf68Q9H3H3 251 aaKnown RBP9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 VAX2Q9UIW0 290 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
SPTLC1-204ENST00000469778 C7orf71A4D174 169 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 FXYD7P58549 80 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 MEF2BQ02080 365 aaPredicted RBP9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 ZNF493Q6ZR52 646 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 C1orf158Q8N1D5 194 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 ZFAND2AQ8N6M9 145 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 LINC01587Q99440 93 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 PSG8Q9UQ74 426 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 X6R8D5 127 aa9.16□□□□□ -0.94
SPTLC1-204ENST00000469778 A0A1B0GV50 99 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 IGLV2-11P01706 119 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 BCL2P10415 239 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 RAB14P61106 215 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 GNG5P63218 68 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 TMEM183BQ1AE95 376 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 RRN3P1Q2M238 152 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 RPH3ALQ9UNE2 315 aa9.15□□□□□ -0.94
SPTLC1-204ENST00000469778 COL7A1Q02388 2944 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 TRAV12-2A0A075B6T6 113 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 TEX48A0A1B0GUV7 120 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 UBE2G1P62253 170 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 Q6AWC8 147 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 ZNF767PQ75MW2 155 aa9.14□□□□□ -0.95
SPTLC1-204ENST00000469778 Q8NAQ8 132 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms