RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 KLRD1Q13241 179 aa13.24□□□□□ -0.29
PMS1-213ENST00000441310 TMEM160Q9NX00 188 aa13.24□□□□□ -0.29
PMS1-213ENST00000441310 LHBP01229 141 aa13.24□□□□□ -0.29
PMS1-213ENST00000441310 PAX8Q06710 450 aa13.24□□□□□ -0.29
PMS1-213ENST00000441310 NFE4Q86UQ8 179 aa13.24□□□□□ -0.29
PMS1-213ENST00000441310 C1QTNF4Q9BXJ3 329 aa13.24□□□□□ -0.29
PMS1-213ENST00000441310 A0A1B0GW15 77 aa13.23□□□□□ -0.29
PMS1-213ENST00000441310 CRIP1P50238 77 aa13.23□□□□□ -0.29
PMS1-213ENST00000441310 GATD1Q8NB37 220 aa13.23□□□□□ -0.29
PMS1-213ENST00000441310 LEPP41159 167 aa13.23□□□□□ -0.29
PMS1-213ENST00000441310 CCL17Q92583 94 aa13.23□□□□□ -0.29
PMS1-213ENST00000441310 PTH2Q96A98 100 aa13.23□□□□□ -0.29
PMS1-213ENST00000441310 OTORQ9NRC9 128 aa13.23□□□□□ -0.29
PMS1-213ENST00000441310 ADIPOQQ15848 244 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 KLF17Q5JT82 389 aaPredicted RBP13.22□□□□□ -0.29
PMS1-213ENST00000441310 MRPL20Q9BYC9 149 aaKnown RBP13.22□□□□□ -0.29
PMS1-213ENST00000441310 UFC1Q9Y3C8 167 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 CGB3P0DN86 165 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 CGB7P0DN87 165 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
PMS1-213ENST00000441310 LYZP61626 148 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 MALRD1Q5VYJ5 2156 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 CGB1A6NKQ9 187 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 ZNF493Q6ZR52 646 aa13.22□□□□□ -0.29
PMS1-213ENST00000441310 TMEM8BA6NDV4 472 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 PRSS29PA6NIE9 313 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 K7ENP7 123 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 TNFRSF1AP19438 455 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 RAXQ9Y2V3 346 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 U3KQK5 164 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 SMCPP49901 116 aaPredicted RBP13.21□□□□□ -0.29
PMS1-213ENST00000441310 C17orf77Q96MU5 243 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
PMS1-213ENST00000441310 DSCAML1Q8TD84 2053 aa13.21□□□□□ -0.3
PMS1-213ENST00000441310 TRAV40A0A0B4J280 105 aa13.2□□□□□ -0.3
PMS1-213ENST00000441310 GAGE5Q13069 117 aa13.2□□□□□ -0.3
PMS1-213ENST00000441310 GAGE6Q13070 117 aa13.2□□□□□ -0.3
PMS1-213ENST00000441310 RAI1Q7Z5J4 1906 aaPredicted RBP13.2□□□□□ -0.3
PMS1-213ENST00000441310 GAFA1Q96PS6 74 aa13.2□□□□□ -0.3
PMS1-213ENST00000441310 PIFOQ8TCI5 191 aa13.2□□□□□ -0.3
PMS1-213ENST00000441310 DCHS2Q6V1P9 2916 aa13.2□□□□□ -0.3
PMS1-213ENST00000441310 FAM90A27PA6NNH2 459 aa13.19□□□□□ -0.3
PMS1-213ENST00000441310 GAS8-AS1O95177 125 aa13.19□□□□□ -0.3
PMS1-213ENST00000441310 HERV-K104P63124 156 aa13.19□□□□□ -0.3
PMS1-213ENST00000441310 DPM2O94777 84 aa13.19□□□□□ -0.3
PMS1-213ENST00000441310 TWIST1Q15672 202 aa13.19□□□□□ -0.3
PMS1-213ENST00000441310 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
PMS1-213ENST00000441310 PIEZO1Q92508 2521 aa13.19□□□□□ -0.3
PMS1-213ENST00000441310 EVI2AP22794 236 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 Q6AWC8 147 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 LINC01548A6NM66 108 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 PRB3Q04118 309 aaPredicted RBP13.18□□□□□ -0.3
PMS1-213ENST00000441310 C8orf46Q8TAG6 207 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 LINC01560Q8TB33 94 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 C17orf100A8MU93 164 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 CCL3L1P16619 93 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 PSMB2P49721 201 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 CFAP126Q5VTH2 177 aa13.18□□□□□ -0.3
PMS1-213ENST00000441310 WNK2Q9Y3S1 2297 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 LOC107984156A0A0G2JMH3 177 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 M0R3E3 92 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
PMS1-213ENST00000441310 GATA4P43694 442 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 SRSF1Q07955 248 aaKnown RBP eCLIP13.17□□□□□ -0.3
PMS1-213ENST00000441310 ARL17AQ8IVW1 177 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 A0A1W2PPI3 338 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 CNIH1O95406 144 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 TPSG1Q9NRR2 321 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 MRPL35Q9NZE8 188 aaKnown RBP13.17□□□□□ -0.3
PMS1-213ENST00000441310 RPUSD1Q9UJJ7 312 aaKnown RBP13.17□□□□□ -0.3
PMS1-213ENST00000441310 MAP1LC3AQ9H492 121 aa13.17□□□□□ -0.3
PMS1-213ENST00000441310 HIVEP3Q5T1R4 2406 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 RITA1Q96K30 269 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 DYNLRB1Q9NP97 96 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 LYNX1G3V0Z9 82 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 RBP4P02753 201 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 LYNX1P0DP58 116 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 MORN3Q6PF18 240 aaPredicted RBP13.16□□□□□ -0.3
PMS1-213ENST00000441310 LYPD2Q6UXB3 125 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 TMEM158Q8WZ71 300 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 TRGV9Q99603 122 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 RAB9BQ9NP90 201 aa13.16□□□□□ -0.3
PMS1-213ENST00000441310 C3orf36Q3SXR2 165 aa13.15□□□□□ -0.3
PMS1-213ENST00000441310 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
PMS1-213ENST00000441310 COL12A1Q99715 3063 aa13.15□□□□□ -0.3
PMS1-213ENST00000441310 ARHGAP32A7KAX9 2087 aa13.15□□□□□ -0.3
PMS1-213ENST00000441310 TRBV7-9A0A0J9YWB2 115 aa13.15□□□□□ -0.3
PMS1-213ENST00000441310 DLX1P56177 255 aa13.15□□□□□ -0.3
PMS1-213ENST00000441310 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
PMS1-213ENST00000441310 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
PMS1-213ENST00000441310 ASH1LQ9NR48 2969 aaKnown RBP13.15□□□□□ -0.3
PMS1-213ENST00000441310 SHISA9B4DS77 424 aa13.15□□□□□ -0.31
PMS1-213ENST00000441310 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.31
PMS1-213ENST00000441310 NDUFA3O95167 84 aa13.15□□□□□ -0.31
PMS1-213ENST00000441310 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.31
PMS1-213ENST00000441310 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.31
PMS1-213ENST00000441310 ZFAND6Q6FIF0 208 aa13.15□□□□□ -0.31
PMS1-213ENST00000441310 SMIM20Q8N5G0 67 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms