RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MAP1LC3AQ9H492 121 aa12.91□□□□□ -0.34
LIMS2-208ENST00000410011 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
LIMS2-208ENST00000410011 ZFHX2Q9C0A1 2572 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-208ENST00000410011 GVINP1Q7Z2Y8 2422 aa12.91□□□□□ -0.34
LIMS2-208ENST00000410011 NDUFS7O75251 213 aa12.91□□□□□ -0.34
LIMS2-208ENST00000410011 ZFP36P26651 326 aaKnown RBP12.91□□□□□ -0.34
LIMS2-208ENST00000410011 CACNG7P62955 275 aa12.91□□□□□ -0.34
LIMS2-208ENST00000410011 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
LIMS2-208ENST00000410011 ORM1P02763 201 aa12.9□□□□□ -0.34
LIMS2-208ENST00000410011 UBE2E1P51965 193 aa12.9□□□□□ -0.34
LIMS2-208ENST00000410011 C15orf32Q32M92 178 aa12.9□□□□□ -0.34
LIMS2-208ENST00000410011 MRPL53Q96EL3 112 aaKnown RBP12.9□□□□□ -0.34
LIMS2-208ENST00000410011 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-208ENST00000410011 SMAD7O15105 426 aaKnown RBP12.9□□□□□ -0.34
LIMS2-208ENST00000410011 GOSR1O95249 250 aa12.9□□□□□ -0.34
LIMS2-208ENST00000410011 HLA-DMBP28068 263 aa12.9□□□□□ -0.34
LIMS2-208ENST00000410011 HIF1ANQ9NWT6 349 aa12.9□□□□□ -0.34
LIMS2-208ENST00000410011 KLRB1Q12918 225 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 OR4X2Q8NGF9 303 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 AJUBAQ96IF1 538 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 C7orf71A4D174 169 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 FCER1GP30273 86 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 ATP6V0BQ99437 205 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 ZMAT4Q9H898 229 aa12.89□□□□□ -0.35
LIMS2-208ENST00000410011 CBY3A6NI87 242 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 PRSS47A8MTI9 375 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 H3BRM9 83 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 CLEC3BP05452 202 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 UCNP55089 124 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 HSD52Q0P140 79 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 FOXE3Q13461 319 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 PRSS57Q6UWY2 283 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 ABCA4P78363 2273 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 A1L4Q6 167 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 CLPSL1A2RUU4 121 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 A6NDN8 102 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 MSRB1Q9NZV6 116 aa12.88□□□□□ -0.35
LIMS2-208ENST00000410011 ADAMTSL5Q6ZMM2 481 aa12.87□□□□□ -0.35
LIMS2-208ENST00000410011 TRAV8-6A0A0B4J262 113 aa12.87□□□□□ -0.35
LIMS2-208ENST00000410011 PRAC2D3DTV9 90 aa12.87□□□□□ -0.35
LIMS2-208ENST00000410011 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
LIMS2-208ENST00000410011 TRBV7-1A0A0A6YYK4 115 aa12.86□□□□□ -0.35
LIMS2-208ENST00000410011 SNAI2O43623 268 aa12.86□□□□□ -0.35
LIMS2-208ENST00000410011 PCP4P48539 62 aa12.86□□□□□ -0.35
LIMS2-208ENST00000410011 ERCC8Q13216 396 aa12.86□□□□□ -0.35
LIMS2-208ENST00000410011 U3KQE9 123 aa12.86□□□□□ -0.35
LIMS2-208ENST00000410011 TLN1Q9Y490 2541 aaKnown RBP12.86□□□□□ -0.35
LIMS2-208ENST00000410011 PTPRQQ9UMZ3 2332 aa12.86□□□□□ -0.35
LIMS2-208ENST00000410011 ATP6V0E1O15342 81 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 CCDC140Q96MF4 163 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 CST9LQ9H4G1 147 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 IGKV3D-20A0A0C4DH25 116 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 C9orf118A6NHY6 69 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 EEF1AKMT3Q96AZ1 226 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 AGPAT4-IT1Q9H0P7 198 aa12.85□□□□□ -0.35
LIMS2-208ENST00000410011 FXYD7P58549 80 aa12.84□□□□□ -0.35
LIMS2-208ENST00000410011 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
LIMS2-208ENST00000410011 Q8N8P6 123 aa12.84□□□□□ -0.35
LIMS2-208ENST00000410011 LEPP41159 167 aa12.84□□□□□ -0.35
LIMS2-208ENST00000410011 ECSCRQ19T08 205 aa12.84□□□□□ -0.35
LIMS2-208ENST00000410011 IL17RELQ6ZVW7 336 aa12.84□□□□□ -0.35
LIMS2-208ENST00000410011 ERASQ7Z444 233 aa12.84□□□□□ -0.35
LIMS2-208ENST00000410011 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 TRAV8-2A0A0B4J237 113 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 ODF1Q14990 250 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 METTL26Q96S19 204 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 HIGD1BQ9P298 99 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 DKK2Q9UBU2 259 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 HHLA3Q9XRX5 114 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 IGHV3-35A0A0C4DH35 117 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
LIMS2-208ENST00000410011 IGHV3OR16-8A0A075B7F1 116 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 ATP5LO75964 103 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 EVI2AP22794 236 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 OCIAD2Q56VL3 154 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 TMEM78Q5T7P6 136 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 LENEPQ9Y5L5 61 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 SAA4P35542 130 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 KIR3DS1Q14943 382 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 CLEC19AQ6UXS0 136 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 GTF2H5Q6ZYL4 71 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
LIMS2-208ENST00000410011 IGHV7-4-1A0A0J9YVY3 117 aa12.81□□□□□ -0.36
LIMS2-208ENST00000410011 GAGE10A6NGK3 116 aa12.81□□□□□ -0.36
LIMS2-208ENST00000410011 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
LIMS2-208ENST00000410011 EFNA4P52798 201 aa12.81□□□□□ -0.36
LIMS2-208ENST00000410011 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
LIMS2-208ENST00000410011 OR2K2Q8NGT1 345 aa12.81□□□□□ -0.36
LIMS2-208ENST00000410011 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms