RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HBBP68871 147 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 C19orf54Q5BKX5 351 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.95□□□□□ -1.78
SMAD4-202ENST00000398417 LIPFP07098 398 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 GRNP28799 593 aaKnown RBP3.95□□□□□ -1.78
SMAD4-202ENST00000398417 SEC61GP60059 68 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 TMEM95Q3KNT9 176 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 STHQ8IWL8 128 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 CCL19Q99731 98 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 IGHV3-49A0A0A0MS15 119 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 MALP21145 153 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 TDRG1Q3Y452 100 aa3.95□□□□□ -1.78
SMAD4-202ENST00000398417 F11RQ9Y624 299 aaKnown RBP3.95□□□□□ -1.78
SMAD4-202ENST00000398417 CEACAM4O75871 244 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 ROS1P08922 2347 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 HIGD1CA8MV81 97 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 PPIFP30405 207 aaKnown RBP3.94□□□□□ -1.78
SMAD4-202ENST00000398417 SPACA3Q8IXA5 215 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 NANOS2P60321 138 aaKnown RBP3.94□□□□□ -1.78
SMAD4-202ENST00000398417 SLAQ13239 276 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 RUSC1-AS1Q66K80 236 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 C18orf32Q8TCD1 76 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 TRAV8-1A0A0A6YYK1 113 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 IGKV3-20P01619 116 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 LINC00173Q6ZV60 143 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 PPP1R27Q86WC6 154 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 C8orf46Q8TAG6 207 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 MRPL53Q96EL3 112 aaKnown RBP3.94□□□□□ -1.78
SMAD4-202ENST00000398417 IGFL3Q6UXB1 125 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 Q86TA4 180 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 FXYD5Q96DB9 178 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 SIGLEC9Q9Y336 463 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 DPM3Q9P2X0 92 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 KLF12Q9Y4X4 402 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 IGKV2-40A0A087WW87 121 aaPredicted RBP3.94□□□□□ -1.78
SMAD4-202ENST00000398417 IGKV2D-40P01614 121 aaPredicted RBP3.94□□□□□ -1.78
SMAD4-202ENST00000398417 TRACP01848 142 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 FAM120AOSQ5T036 256 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 FMC1Q96HJ9 113 aa3.94□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE10A6NGK3 116 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 BUB1B-PAK6H3BSN5 160 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 CA7P43166 264 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 FAM71F2Q6NXP2 309 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 NEU4Q8WWR8 484 aaPredicted RBP3.93□□□□□ -1.78
SMAD4-202ENST00000398417 ZFAND3Q9H8U3 227 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 SMIM27A0A1W2PRY6 76 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 NDUFB8O95169 186 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 GATD1Q8NB37 220 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 C8orf49Q96NF6 230 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 TMEM213A2RRL7 107 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE7O76087 117 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE12FP0CL80 117 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE12GP0CL81 117 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE12IP0CL82 117 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 PDLIM4P50479 330 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE1Q13065 139 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 SFTA2Q6UW10 78 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 IGKV1D-37A0A075B6S9 117 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 SHISA9B4DS77 424 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 SPANXN1Q5VSR9 72 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 THAP8Q8NA92 274 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 C20orf144Q9BQM9 153 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 PRELID3AQ96N28 172 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 SLC25A39Q9BZJ4 359 aaPredicted RBP3.93□□□□□ -1.78
SMAD4-202ENST00000398417 LYZL1Q6UWQ5 148 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.93□□□□□ -1.78
SMAD4-202ENST00000398417 IGKV3D-20A0A0C4DH25 116 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 NBR2O15453 112 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 HLA-DMBP28068 263 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 C9orf153Q5TBE3 101 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 SLC25A34Q6PIV7 304 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 TEX43Q6ZNM6 134 aa3.93□□□□□ -1.78
SMAD4-202ENST00000398417 GVINP1Q7Z2Y8 2422 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 FCN3O75636 299 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 TOMM40O96008 361 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 LY6EQ16553 131 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 GDF5OSQ5U4N7 250 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 LINC00311Q8N616 119 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 FAM167A-AS1Q96KT0 104 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 TRGV9Q99603 122 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 NBEAQ8NFP9 2946 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 DAD1P61803 113 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 ERCC8Q13216 396 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 CLEC19AQ6UXS0 136 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 TMEM61Q8N0U2 210 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 C21orf62Q9NYP8 219 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 LTBP2Q14767 1821 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 TMEM8BA6NDV4 472 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 SH2D1AO60880 128 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 COX6B1P14854 86 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 FAM74A4Q5TZK3 123 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 Q8TAT8 98 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 ZNF492Q9P255 531 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 NCR2O95944 276 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 ARMS2P0C7Q2 107 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms