RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 CACNA1AO00555 2505 aa12.08□□□□□ -0.48
CHL1-202ENST00000397491 IGLL5B9A064 214 aa12.07□□□□□ -0.48
CHL1-202ENST00000397491 ACACBO00763 2458 aa12.07□□□□□ -0.48
CHL1-202ENST00000397491 IL17RELQ6ZVW7 336 aa12.07□□□□□ -0.48
CHL1-202ENST00000397491 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
CHL1-202ENST00000397491 SOCS3O14543 225 aa12.07□□□□□ -0.48
CHL1-202ENST00000397491 B3GALT5-AS1P59052 145 aa12.07□□□□□ -0.48
CHL1-202ENST00000397491 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 C5orf64Q2M2E5 130 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 C3orf36Q3SXR2 165 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 UTF1Q5T230 341 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
CHL1-202ENST00000397491 TMEM141Q96I45 108 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 WFDC2Q14508 124 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 ANKRD39Q53RE8 183 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 FXYD5Q96DB9 178 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 ANKRD29Q8N6D5 301 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 ZNF883P0CG24 379 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 FOXI2Q6ZQN5 318 aa12.06□□□□□ -0.48
CHL1-202ENST00000397491 TRAV41A0A0B4J266 112 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 TRGV4A0A0C4DH28 118 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 PRR20EP86478 221 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 PRR20CP86479 221 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 PRR20DP86480 221 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 PRR20BP86481 221 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 PRR20AP86496 221 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 G3V4G9 280 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 LMO1P25800 156 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 DTX2Q86UW9 622 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 PRR25Q96S07 402 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 TMEM178BH3BS89 294 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 STHQ8IWL8 128 aa12.05□□□□□ -0.48
CHL1-202ENST00000397491 BUB1B-PAK6H3BSN5 160 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 MYLKQ15746 1914 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 A0A087WX48 190 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 KLRD1Q13241 179 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 FAM120AOSQ5T036 256 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 TMEM126AQ9H061 195 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 CRYBA4P53673 196 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 RSPO1Q2MKA7 263 aaPredicted RBP12.04□□□□□ -0.48
CHL1-202ENST00000397491 SPG11Q96JI7 2443 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 PRSS29PA6NIE9 313 aa12.04□□□□□ -0.48
CHL1-202ENST00000397491 LINC01545Q5VT33 79 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 LTAP01374 205 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 C7orf69Q9H7B7 122 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 MRAPQ8TCY5 172 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 SMIM2Q9BVW6 85 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 PTPRQQ9UMZ3 2332 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 HEATR5AQ86XA9 2040 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 PEMTQ9UBM1 199 aa12.03□□□□□ -0.48
CHL1-202ENST00000397491 LTBP1Q14766 1721 aa12.02□□□□□ -0.48
CHL1-202ENST00000397491 K7EMI3 77 aa12.02□□□□□ -0.48
CHL1-202ENST00000397491 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.48
CHL1-202ENST00000397491 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.48
CHL1-202ENST00000397491 SIP14410 1827 aa12.02□□□□□ -0.49
CHL1-202ENST00000397491 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.02□□□□□ -0.49
CHL1-202ENST00000397491 J3QQQ9 107 aa12.02□□□□□ -0.49
CHL1-202ENST00000397491 RNF166Q96A37 237 aaPredicted RBP12.02□□□□□ -0.49
CHL1-202ENST00000397491 C6orf226Q5I0X4 101 aa12.02□□□□□ -0.49
CHL1-202ENST00000397491 TRPT1Q86TN4 253 aaKnown RBP12.02□□□□□ -0.49
CHL1-202ENST00000397491 C17orf82Q86X59 251 aaPredicted RBP12.02□□□□□ -0.49
CHL1-202ENST00000397491 WT1-ASQ06250 92 aa12.02□□□□□ -0.49
CHL1-202ENST00000397491 FXYD2P54710 66 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 RS1O15537 224 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 CFC1P0CG37 223 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 Q0VFX4 171 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 TRBV7-1A0A0A6YYK4 115 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 SDHAF1A6NFY7 115 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 ZFP36L1Q07352 338 aaKnown RBP12.01□□□□□ -0.49
CHL1-202ENST00000397491 CUL9Q8IWT3 2517 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 TMEM14CQ9P0S9 112 aa12.01□□□□□ -0.49
CHL1-202ENST00000397491 HTN3P15516 51 aa12□□□□□ -0.49
CHL1-202ENST00000397491 TMEM219Q86XT9 240 aa12□□□□□ -0.49
CHL1-202ENST00000397491 WDR86Q86TI4 376 aa12□□□□□ -0.49
CHL1-202ENST00000397491 IGHG4P01861 327 aa12□□□□□ -0.49
CHL1-202ENST00000397491 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
CHL1-202ENST00000397491 ETV2O00321 342 aaPredicted RBP12□□□□□ -0.49
CHL1-202ENST00000397491 IGLV3-1P01715 115 aa11.99□□□□□ -0.49
CHL1-202ENST00000397491 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
CHL1-202ENST00000397491 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
CHL1-202ENST00000397491 CCL19Q99731 98 aa11.99□□□□□ -0.49
CHL1-202ENST00000397491 DKK1O94907 266 aa11.99□□□□□ -0.49
CHL1-202ENST00000397491 UBL5Q9BZL1 73 aa11.99□□□□□ -0.49
CHL1-202ENST00000397491 NTN3O00634 580 aaPredicted RBP11.98□□□□□ -0.49
CHL1-202ENST00000397491 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
CHL1-202ENST00000397491 ZNF134P52741 427 aa11.98□□□□□ -0.49
CHL1-202ENST00000397491 TRGV1A0A0A0MS02 117 aa11.98□□□□□ -0.49
CHL1-202ENST00000397491 COX6B1P14854 86 aa11.98□□□□□ -0.49
CHL1-202ENST00000397491 ZNF415Q09FC8 603 aa11.98□□□□□ -0.49
CHL1-202ENST00000397491 FRMD6-AS1P0C7T7 363 aa11.98□□□□□ -0.49
CHL1-202ENST00000397491 ZNF672Q499Z4 452 aaPredicted RBP11.98□□□□□ -0.49
CHL1-202ENST00000397491 TEN1Q86WV5 123 aa11.98□□□□□ -0.49
CHL1-202ENST00000397491 FOXI1Q12951 378 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms