RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 IGF1P05019 195 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 IGFL4Q6B9Z1 124 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 SLC50A1Q9BRV3 221 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 IGHV4-30-2A0A087WSY4 118 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 RBAKDNA6NC62 111 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 BRI3O95415 125 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 BMI1P35226 326 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 UBE2V1Q13404 147 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 SPOCK3Q9BQ16 436 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 COX11Q9Y6N1 276 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 TRAV9-2A0A087WT02 112 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 IGHV4-38-2P0DP08 117 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 ZNF738Q8NE65 137 aa11.82□□□□□ -0.52
UBE2D3-207ENST00000394801 USP9XQ93008 2570 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 ZFHX3Q15911 3703 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 RPS20P60866 119 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 ZNF575Q86XF7 245 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 METTL26Q96S19 204 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 K7EP13 123 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 M0QZ24 198 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 CRXO43186 299 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 HINT1P49773 126 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 ANKRD39Q53RE8 183 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 Q8TAT8 98 aa11.81□□□□□ -0.52
UBE2D3-207ENST00000394801 CELSR1Q9NYQ6 3014 aa11.8□□□□□ -0.52
UBE2D3-207ENST00000394801 IGHV1-24A0A0C4DH33 117 aa11.8□□□□□ -0.52
UBE2D3-207ENST00000394801 MSMBP08118 114 aa11.8□□□□□ -0.52
UBE2D3-207ENST00000394801 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
UBE2D3-207ENST00000394801 A6NDX4 124 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 IGHG2P01859 326 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 OR5AL1P0C617 328 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 RBX1P62877 108 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 ZFYVE26Q68DK2 2539 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 MAJINQ3KP22 176 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 RNASE8Q8TDE3 154 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 TPPP3Q9BW30 176 aa11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 SETXQ7Z333 2677 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-207ENST00000394801 H3BUA1 57 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 TRGV3P03979 118 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 IGLC6P0CF74 106 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 PPIFP30405 207 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 TMEM70Q9BUB7 260 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 LINC00527Q9UJ94 153 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 SPG11Q96JI7 2443 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 TMSB15BA0A087X1C1 80 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 TRAV8-2A0A0B4J237 113 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 U3KQK5 164 aa11.78□□□□□ -0.52
UBE2D3-207ENST00000394801 FAM104BQ5XKR9 115 aa11.77□□□□□ -0.52
UBE2D3-207ENST00000394801 RNF182Q8N6D2 247 aa11.77□□□□□ -0.52
UBE2D3-207ENST00000394801 CELSR2Q9HCU4 2923 aa11.77□□□□□ -0.52
UBE2D3-207ENST00000394801 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.52
UBE2D3-207ENST00000394801 LEPROTL1O95214 131 aa11.77□□□□□ -0.53
UBE2D3-207ENST00000394801 IGLL1P15814 213 aa11.77□□□□□ -0.53
UBE2D3-207ENST00000394801 DSCR9P59020 149 aa11.77□□□□□ -0.53
UBE2D3-207ENST00000394801 ERCC8Q13216 396 aa11.77□□□□□ -0.53
UBE2D3-207ENST00000394801 HIF1ANQ9NWT6 349 aa11.77□□□□□ -0.53
UBE2D3-207ENST00000394801 TMEM213A2RRL7 107 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 B4DSR2 109 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 H3BUX3 64 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 FER1L6-AS1Q8NA97 138 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 USMG5Q96IX5 58 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 CNFNQ9BYD5 112 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 ZNF138P52744 262 aa11.76□□□□□ -0.53
UBE2D3-207ENST00000394801 MAP1AP78559 2803 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 ZNF207O43670 478 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 GATA3P23771 443 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 ARL3P36405 182 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 CDKN1BP46527 198 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 LY6EQ16553 131 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 SPATA12Q7Z6I5 190 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 GLMPQ8WWB7 406 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 AGPAT4-IT1Q9H0P7 198 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 SYS1-DBNDD2H3BUS1 97 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 NDUFA4O00483 81 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 AP5S1Q9NUS5 200 aa11.75□□□□□ -0.53
UBE2D3-207ENST00000394801 IGHV3-49A0A0A0MS15 119 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 C9orf47Q6ZRZ4 202 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 LINC00173Q6ZV60 143 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 Q6ZVH6 145 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 MYO18BQ8IUG5 2567 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 AVPP01185 164 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 ORM1P02763 201 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 IL17RELQ6ZVW7 336 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 AMN1Q8IY45 258 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 ST20Q9HBF5 79 aa11.74□□□□□ -0.53
UBE2D3-207ENST00000394801 CSN3P07498 182 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 243.8 ms