RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TCTEX1D1Q8N7M0 179 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 TMEM229BQ8NBD8 167 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 MCEEQ96PE7 176 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 CIB3Q96Q77 187 aaPredicted RBP-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 SIGMAR1Q99720 223 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 OR2J1Q9GZK6 312 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 COA4Q9NYJ1 87 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 MRPL36Q9P0J6 103 aaKnown RBP-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 MYCBP2O75592 4640 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 ATG2AQ2TAZ0 1938 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 MED13LQ71F56 2210 aa-0.46□□□□□ -2.48
SNORD28B-201ENST00000390993 SOGA1O94964 1423 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 HECTD4Q9Y4D8 3996 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 LAMC3Q9Y6N6 1575 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 SPAG17Q6Q759 2223 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 CETN3O15182 167 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 LYPLA2O95372 231 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 MPC1LP0DKB6 136 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 SPRR2DP22532 72 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 PHBP35232 272 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 CAPZBP47756 277 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 DNAJB13P59910 316 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 TAF1AQ15573 450 aaPredicted RBP-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 KRTAP19-7Q3SYF9 63 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 CCSMST1Q4G0I0 132 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 FKBP1CQ5VVH2 108 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 IZUMO2Q6UXV1 221 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 ZCCHC23Q6ZST2 131 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 LINC00269Q8N2A0 174 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 OR4B1Q8NGF8 309 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 OR10X1Q8NGY0 326 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 BPESC1Q9GZL8 116 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 FAM32AQ9Y421 112 aaKnown RBP-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 AKAP6Q13023 2319 aa-0.47□□□□□ -2.48
SNORD28B-201ENST00000390993 ESPL1Q14674 2120 aa-0.47□□□□□ -2.49
SNORD28B-201ENST00000390993 TANC1Q9C0D5 1861 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 NBDYA0A0U1RRE5 68 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 TMEM30CPA0ZSE6 113 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 C9JAW5 83 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 TPST1O60507 370 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 APOC1P02654 83 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 MT-ND6P03923 174 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 CXCL1P09341 107 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 FABP4P15090 132 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 OGNP20774 298 aaKnown RBP-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 RPL35P42766 123 aaKnown RBP-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 NDUFA6P56556 154 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 COTL1Q14019 142 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 OR8J3Q8NGG0 315 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 DMAC1Q96GE9 116 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 C19orf12Q9NSK7 152 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 PKDREJQ9NTG1 2253 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 NISCHQ9Y2I1 1504 aa-0.48□□□□□ -2.49
SNORD28B-201ENST00000390993 ALMS1Q8TCU4 4167 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 PTPRQQ9UMZ3 2332 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 TRAV12-2A0A075B6T6 113 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 RIIAD1A6NNX1 92 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 K7ERJ3 54 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 CST7O76096 145 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 TRGC2P03986 189 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 RPS17P08708 135 aaKnown RBP-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 NMBP08949 121 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 NCALDP61601 193 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 HBBP68871 147 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 C1orf140Q5VVS0 124 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 CSAG1Q6PB30 78 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 CFAP53Q96M91 514 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 ATG5Q9H1Y0 275 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 DOCK4Q8N1I0 1966 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 TNXBP22105 4242 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 PKD1L1Q8TDX9 2849 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 UHRF1BP1Q6BDS2 1440 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 KIAA1107Q9UPP5 1409 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 ABCA1O95477 2261 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 CDK13Q14004 1512 aaKnown RBP-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 APC2O95996 2303 aa-0.49□□□□□ -2.49
SNORD28B-201ENST00000390993 NINQ8N4C6 2090 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 F5P12259 2224 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 TMEM114B3SHH9 223 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 G3V2T6 193 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 H7BYZ3 331 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 H7C1C5 153 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 IFNA6P05013 189 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 APODP05090 189 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 TPT1P13693 172 aaKnown RBP-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 PPP1R2P41236 205 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 HSPE1P61604 102 aaKnown RBP-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 LCN6P62502 163 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 DEFB109BQ30KR1 87 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 UNQ5815/PRO19632Q6UWF5 114 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 OR8J2Q8NGG1 315 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 OR2H1Q9GZK4 316 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 BET1LQ9NYM9 111 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 RTL9Q8NET4 1388 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 CAMSAP2Q08AD1 1489 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 AFDNP55196 1824 aaKnown RBP-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 CSMD3Q7Z407 3707 aa-0.5□□□□□ -2.49
SNORD28B-201ENST00000390993 ANKRD17O75179 2603 aaKnown RBP-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 TEX49A0A1B0GTD5 131 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 TMEM189A5PLL7 270 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms