RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 LIME1Q9H400 295 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 SPANXB1Q9NS25 103 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 U3KQE9 123 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 PIEZO1Q92508 2521 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 LYPD3O95274 346 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 SLC25A16P16260 332 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 FAM27E3Q08E93 113 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 HIVEP2P31629 2446 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 DEFB130BP0DP73 79 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 DEFB130AP0DP74 79 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 SMIM27A0A1W2PRY6 76 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 K7EN84 100 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 V9GYV3 84 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 FOXS1O43638 330 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 IL18BPO95998 194 aa9.05□□□□□ -0.96
CDC42BPA-205ENST00000366769 SPTBN4Q9H254 2564 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 COL5A1P20908 1838 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 NBR2O15453 112 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 CECR9P0C854 216 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 SIGLEC15Q6ZMC9 328 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 NDUFB8O95169 186 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 IGHG3P01860 377 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 RNF125Q96EQ8 232 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 OVOL2Q9BRP0 275 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 FBLN5Q9UBX5 448 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 ARMS2P0C7Q2 107 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 PAX8Q06710 450 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 WDR90Q96KV7 1748 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 A0A1B0GX51 115 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 SH2D1AO60880 128 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 NEU4Q8WWR8 484 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 SIGLEC8Q9NYZ4 499 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 SRRM4A7MD48 611 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 CCL3L1P16619 93 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 FXYD2P54710 66 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 SS18Q15532 418 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 NTN5Q8WTR8 489 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 PTH2Q96A98 100 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 LTBP4Q8N2S1 1624 aa9.04□□□□□ -0.96
CDC42BPA-205ENST00000366769 LYNX1G3V0Z9 82 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 LYNX1P0DP58 116 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 FGF6P10767 208 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 Q86TA4 180 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 TRPT1Q86TN4 253 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 CTHRC1Q96CG8 243 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 DKK2Q9UBU2 259 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 F5H768 121 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 PRIMA1Q86XR5 153 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 BAALCQ8WXS3 180 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 PRRC2CQ9Y520 2896 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 YPEL1O60688 119 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 RPL36AP83881 106 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 RPL36ALQ969Q0 106 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 YPEL2Q96QA6 119 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 HAMPP81172 84 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 CACNG8Q8WXS5 425 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 SLC25A39Q9BZJ4 359 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 IGKV3D-7A0A0C4DH55 119 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 SPXQ9BT56 116 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 TIMM21Q9BVV7 248 aa9.03□□□□□ -0.96
CDC42BPA-205ENST00000366769 TM4SF5O14894 197 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 C8orf49Q96NF6 230 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 RPUSD1Q9UJJ7 312 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 IGKV1-27A0A075B6S5 117 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 TRAV3A0A0B4J244 114 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 FOXI1Q12951 378 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 EGR2P11161 476 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 ZCCHC24Q8N2G6 241 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 PKD1L2Q7Z442 2459 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 A0A087WWL8 130 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 QRFPP83859 136 aa9.02□□□□□ -0.97
CDC42BPA-205ENST00000366769 TRAV26-2A0A0B4J265 109 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 INAFM2P0DMQ5 153 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 C15orf61A6NNL5 157 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 CHKB-CPT1BH3BT56 60 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 ZNF561-AS1K7EIQ3 104 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 TEN1Q86WV5 123 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 NDPQ00604 133 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 YPEL3P61236 119 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 LILRA6Q6PI73 481 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 SLC22A18ASQ8N1D0 253 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 KLHL30-AS1Q8NEE0 82 aa9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 COLQQ9Y215 455 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-205ENST00000366769 TMEM14EPQ6UXP3 125 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 FOXI2Q6ZQN5 318 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 COA6Q5JTJ3 125 aaKnown RBP9□□□□□ -0.97
CDC42BPA-205ENST00000366769 A4D1N5 150 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 PFN2P35080 140 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 NDUFS7O75251 213 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 C20orf78Q9BR46 151 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 C5orf63A6NC05 138 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 SHISA9B4DS77 424 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 Q6ZT83 130 aa9□□□□□ -0.97
CDC42BPA-205ENST00000366769 NTF4P34130 210 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 253.7 ms