RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 UMAD1C9J7I0 102 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 CXorf1O96002 111 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 HLA-DRB4P13762 266 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
SSX3-201ENST00000298396 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 TAS2R45P59539 299 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 SNRPD3P62318 126 aaKnown RBP4.31□□□□□ -1.72
SSX3-201ENST00000298396 EIF5AP63241 154 aaKnown RBP4.31□□□□□ -1.72
SSX3-201ENST00000298396 GUK1Q16774 197 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 HAGHQ16775 308 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 ACTL10Q5JWF8 245 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 FOXI2Q6ZQN5 318 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 S100A7AQ86SG5 101 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 ASCL2Q99929 193 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 B9D2Q9BPU9 175 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 SLC50A1Q9BRV3 221 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 Q9H3A6 140 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 RETNQ9HD89 108 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 HLA-DRB4X5D2U9 266 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 LYSTQ99698 3801 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 MUC4Q99102 2169 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 IGKV2-40A0A087WW87 121 aaPredicted RBP4.3□□□□□ -1.72
SSX3-201ENST00000298396 TRAV1-1A0A0B4J248 108 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 A0A1B0GV50 99 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 FAM74A7A6NL05 159 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 IGKV2D-40P01614 121 aaPredicted RBP4.3□□□□□ -1.72
SSX3-201ENST00000298396 ID1P41134 155 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 RANP62826 216 aaKnown RBP4.3□□□□□ -1.72
SSX3-201ENST00000298396 GNG5P63218 68 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 IFITM2Q01629 132 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 ERCC8Q13216 396 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 DEFB121Q5J5C9 76 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 SAMD13Q5VXD3 122 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 DPPA3Q6W0C5 159 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 ZNF738Q8NE65 137 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 OR8A1Q8NGG7 326 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 PCNPQ8WW12 178 aaKnown RBP4.3□□□□□ -1.72
SSX3-201ENST00000298396 RPUSD4Q96CM3 377 aaKnown RBP4.3□□□□□ -1.72
SSX3-201ENST00000298396 MRPL53Q96EL3 112 aaKnown RBP4.3□□□□□ -1.72
SSX3-201ENST00000298396 VGLL1Q99990 258 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 TM2D3Q9BRN9 247 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 SLC35B3Q9H1N7 401 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 TUBA4BQ9H853 241 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 OTORQ9NRC9 128 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 RNF24Q9Y225 148 aa4.3□□□□□ -1.72
SSX3-201ENST00000298396 LOC102724200A0A096LPH7 203 aaPredicted RBP4.29□□□□□ -1.72
SSX3-201ENST00000298396 PGPA6NDG6 321 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 CRXO43186 299 aaPredicted RBP4.29□□□□□ -1.72
SSX3-201ENST00000298396 IGKV3-20P01619 116 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 RBMY1A1P0DJD3 496 aaKnown RBP4.29□□□□□ -1.72
SSX3-201ENST00000298396 RBMY1CP0DJD4 496 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 CT45A10P0DMU9 189 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 ATP5G3P48201 142 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 RAB5CP51148 216 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 CNN1P51911 297 aaKnown RBP4.29□□□□□ -1.72
SSX3-201ENST00000298396 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
SSX3-201ENST00000298396 FXYD7P58549 80 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 UBE2G2P60604 165 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 PSG9Q00887 426 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 HIST1H1AQ02539 215 aaPredicted RBP4.29□□□□□ -1.72
SSX3-201ENST00000298396 RBMY1FQ15415 496 aaKnown RBP4.29□□□□□ -1.72
SSX3-201ENST00000298396 PRR9Q5T870 116 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 TEX261Q6UWH6 196 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 STHQ8IWL8 128 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 CCDC28AQ8IWP9 274 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 LYPD1Q8N2G4 141 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 CSNK1G2-AS1Q8NCQ2 148 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 ZNF680Q8NEM1 530 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 LYPD6BQ8NI32 183 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 LRRC20Q8TCA0 184 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 SFT2D1Q8WV19 159 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 FAM19A4Q96LR4 140 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 C1orf43Q9BWL3 253 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 AGPAT4-IT1Q9H0P7 198 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 TMEM167BQ9NRX6 74 aa4.29□□□□□ -1.72
SSX3-201ENST00000298396 PLECQ15149 4684 aaKnown RBP4.28□□□□□ -1.72
SSX3-201ENST00000298396 TRAV8-1A0A0A6YYK1 113 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 KIR2DL5BA0A0G2JN68 375 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 KIR2DL5BA0A0G2JPC4 375 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 A0A1W2PRE2 83 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 ZNF705EA8MWA4 302 aaPredicted RBP4.28□□□□□ -1.72
SSX3-201ENST00000298396 M0R2Z0 102 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 PAGE4O60829 102 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 IGLV2-11P01706 119 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 DEFB135Q30KP9 77 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 Q6ZQT7 251 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 C9orf47Q6ZRZ4 202 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 IQCF2Q8IXL9 164 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 KIR2DL5AQ8N109 375 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 OR4B1Q8NGF8 309 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 KIR2DL5BQ8NHK3 375 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 TVP23CQ96ET8 276 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 OVOL2Q9BRP0 275 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 CLEC5AQ9NY25 188 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 PRELID1Q9Y255 219 aa4.28□□□□□ -1.72
SSX3-201ENST00000298396 TRAV12-2A0A075B6T6 113 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 CA1P00915 261 aaPredicted RBP4.27□□□□□ -1.73
SSX3-201ENST00000298396 TCRAP04437 139 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 PRM2P04554 102 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 SLC25A5P05141 298 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms