RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 C9orf172C9J069 976 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 ABHD17AQ96GS6 310 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 LRP4O75096 1905 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 PPP1R27Q86WC6 154 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 NXT2Q9NPJ8 142 aaKnown RBP12.92□□□□□ -0.34
GPC1-201ENST00000264039 DEFB109BQ30KR1 87 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 RUSC1-AS1Q66K80 236 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 ZNF562Q6V9R5 426 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 TRGV9Q99603 122 aa12.92□□□□□ -0.34
GPC1-201ENST00000264039 IGKV1D-37A0A075B6S9 117 aa12.91□□□□□ -0.34
GPC1-201ENST00000264039 SIVA1O15304 175 aa12.91□□□□□ -0.34
GPC1-201ENST00000264039 ERCC8Q13216 396 aa12.91□□□□□ -0.34
GPC1-201ENST00000264039 GP9P14770 177 aa12.91□□□□□ -0.34
GPC1-201ENST00000264039 RRN3P1Q2M238 152 aa12.91□□□□□ -0.34
GPC1-201ENST00000264039 TMEM200BQ69YZ2 307 aa12.91□□□□□ -0.34
GPC1-201ENST00000264039 GAFA1Q96PS6 74 aa12.91□□□□□ -0.34
GPC1-201ENST00000264039 LINC00312Q9Y6C7 94 aa12.9□□□□□ -0.34
GPC1-201ENST00000264039 SCGB1A1P11684 91 aa12.9□□□□□ -0.34
GPC1-201ENST00000264039 GLRXP35754 106 aa12.9□□□□□ -0.34
GPC1-201ENST00000264039 C9JAW5 83 aa12.9□□□□□ -0.34
GPC1-201ENST00000264039 GAS8-AS1O95177 125 aa12.9□□□□□ -0.34
GPC1-201ENST00000264039 IGHV1-46P01743 117 aa12.9□□□□□ -0.34
GPC1-201ENST00000264039 KLF12Q9Y4X4 402 aa12.9□□□□□ -0.34
GPC1-201ENST00000264039 TRBV19A0A075B6N1 114 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 IGKV3-15P01624 115 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 EGR2P11161 476 aaPredicted RBP12.89□□□□□ -0.35
GPC1-201ENST00000264039 PRRG2O14669 202 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 PLSCR4Q9NRQ2 329 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 FABP5P3A8MUU1 101 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 LYNX1G3V0Z9 82 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 LYNX1P0DP58 116 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 FOXI1Q12951 378 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 MSMPQ1L6U9 139 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 TMEM155Q4W5P6 130 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 MAPKAPK5-AS1Q8N8E1 139 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 DSCAMO60469 2012 aa12.89□□□□□ -0.35
GPC1-201ENST00000264039 DLX6P56179 175 aa12.88□□□□□ -0.35
GPC1-201ENST00000264039 NCKAP5O14513 1909 aa12.88□□□□□ -0.35
GPC1-201ENST00000264039 SLC25A16P16260 332 aa12.88□□□□□ -0.35
GPC1-201ENST00000264039 GATA3P23771 443 aa12.88□□□□□ -0.35
GPC1-201ENST00000264039 LYPD2Q6UXB3 125 aa12.88□□□□□ -0.35
GPC1-201ENST00000264039 ECSCRQ19T08 205 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 KLHL30-AS1Q8NEE0 82 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 HERVK_113P61574 105 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 LAGE3Q14657 143 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 ODF1Q14990 250 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 TMEM78Q5T7P6 136 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 ZFP2Q6ZN57 461 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 FDCSPQ8NFU4 85 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 POU2AF1Q16633 256 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 KIR2DL4Q99706 377 aa12.87□□□□□ -0.35
GPC1-201ENST00000264039 TM4SF5O14894 197 aa12.86□□□□□ -0.35
GPC1-201ENST00000264039 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
GPC1-201ENST00000264039 C7orf69Q9H7B7 122 aa12.86□□□□□ -0.35
GPC1-201ENST00000264039 LTBP2Q14767 1821 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 TRAV2A0A0B4J234 112 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 TRAV17A0A0B4J275 112 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 NTN3O00634 580 aaPredicted RBP12.85□□□□□ -0.35
GPC1-201ENST00000264039 GAGE5Q13069 117 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 GAGE6Q13070 117 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 ANKHD1Q8IWZ3 2542 aaKnown RBP12.85□□□□□ -0.35
GPC1-201ENST00000264039 MFAP4P55083 255 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 HERV-K104P63124 156 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 DTX2Q86UW9 622 aa12.85□□□□□ -0.35
GPC1-201ENST00000264039 CRIP1P50238 77 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 A0A096LNJ9 63 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 E9PLD3 99 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
GPC1-201ENST00000264039 FAM74A4Q5TZK3 123 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 THAP8Q8NA92 274 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 PRADC1Q9BSG0 188 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 SIGLEC9Q9Y336 463 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 PPDPFLQ8WWR9 84 aa12.84□□□□□ -0.35
GPC1-201ENST00000264039 NPC2P61916 151 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 C1QTNF4Q9BXJ3 329 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 PTPRBP23467 1997 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 WNK1Q9H4A3 2382 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 Q6ZUT4 128 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 PRR25Q96S07 402 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 XGP55808 180 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 SRSF6Q13247 344 aaKnown RBP12.83□□□□□ -0.36
GPC1-201ENST00000264039 SHANK2-AS3Q9BTD1 123 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 SMPXQ9UHP9 88 aa12.83□□□□□ -0.36
GPC1-201ENST00000264039 SVIPQ8NHG7 77 aa12.82□□□□□ -0.36
GPC1-201ENST00000264039 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
GPC1-201ENST00000264039 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
GPC1-201ENST00000264039 HTN1P15515 57 aa12.82□□□□□ -0.36
GPC1-201ENST00000264039 LGALS3P17931 250 aaKnown RBP12.82□□□□□ -0.36
GPC1-201ENST00000264039 SIGLEC15Q6ZMC9 328 aa12.81□□□□□ -0.36
GPC1-201ENST00000264039 ZNF71Q9NQZ8 489 aaPredicted RBP12.81□□□□□ -0.36
GPC1-201ENST00000264039 C21orf62Q9NYP8 219 aa12.81□□□□□ -0.36
GPC1-201ENST00000264039 ADAMTS20P59510 1910 aa12.81□□□□□ -0.36
GPC1-201ENST00000264039 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
GPC1-201ENST00000264039 H7C1H1 209 aa12.8□□□□□ -0.36
GPC1-201ENST00000264039 IGKV1-17P01599 117 aa12.8□□□□□ -0.36
GPC1-201ENST00000264039 MYCNOSP40205 109 aa12.8□□□□□ -0.36
GPC1-201ENST00000264039 RPL13AP40429 203 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms