RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 GOSR1O95249 250 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 IGKV2D-40P01614 121 aaPredicted RBP6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 DIAPH2-AS1Q14236 149 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 LINC00311Q8N616 119 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 C21orf62Q9NYP8 219 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 POLEQ07864 2286 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 NPYP01303 97 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 APOBEC3AP31941 199 aaPredicted RBP6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 MYCNOSP40205 109 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 CKS1BP61024 79 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 PDE6HQ13956 83 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 GFRALQ6UXV0 394 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 CHTOPQ9Y3Y2 248 aaKnown RBP6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 NPIPB6E9PJ23 425 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 H3BVH4 76 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 APOMO95445 188 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 TEX36Q5VZQ5 186 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 ZNF474Q6S9Z5 364 aaPredicted RBP6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 C2orf91Q6ZV80 131 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 TMEM158Q8WZ71 300 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 C8orf49Q96NF6 230 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 ARFGEF3Q5TH69 2177 aa6.68□□□□□ -1.34
SMARCA2-246ENST00000635739 MBD3L4A6NDZ8 208 aaPredicted RBP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 MBD3L3A6NE82 208 aaPredicted RBP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 MBD3L5A6NJ08 208 aaPredicted RBP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 TMEM178BH3BS89 294 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 MBD3L2Q8NHZ7 208 aaPredicted RBP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 BDP1A6H8Y1 2624 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 K7EM74 188 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 HOXA3O43365 443 aaPredicted RBP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 WISP2O76076 250 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 SCGB1A1P11684 91 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 PPIFP30405 207 aaKnown RBP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 RAB9AP51151 201 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 PRB3Q04118 309 aaPredicted RBP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 FREM2Q5SZK8 3169 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 CEP192Q8TEP8 1941 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 IGHV1-3A0A0C4DH29 117 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 NDUFS8O00217 210 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 TNFRSF6BO95407 300 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 ZNF562Q6V9R5 426 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 IGHV3-35A0A0C4DH35 117 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 K7ERJ3 54 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 CRYGCP07315 174 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 PSMB2P49721 201 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 SRSF1Q07955 248 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 MSMPQ1L6U9 139 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 Q1RN00 199 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 Q8TAT8 98 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 SCGB3A1Q96QR1 104 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 SPRY4Q9C004 299 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 CELSR3Q9NYQ7 3312 aa6.67□□□□□ -1.34
SMARCA2-246ENST00000635739 CGB1A6NKQ9 187 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 COX6B1P14854 86 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 RPL11P62913 178 aaKnown RBP6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 C17orf77Q96MU5 243 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 ATP6V0BQ99437 205 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 PLXNB1O43157 2135 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 CD3EP07766 207 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 CNTFRP26992 372 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 CCDC144NLQ6NUI1 221 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 LYPD2Q6UXB3 125 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 ZNF418Q8TF45 676 aaPredicted RBP6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 ARPC1AQ92747 370 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 TRAV40A0A0B4J280 105 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 H3BRN7 92 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 NBR2O15453 112 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 MGPP08493 103 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 BSPH1Q075Z2 132 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 LAGE3Q14657 143 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 CEND1Q8N111 149 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 RNF5Q99942 180 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 LINC00574Q9H8X3 128 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 DPM3Q9P2X0 92 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 CYSLTR1Q9Y271 337 aa6.66□□□□□ -1.34
SMARCA2-246ENST00000635739 TRBV6-1A0A0K0K1D8 114 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 FXYD2P54710 66 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 PRR25Q96S07 402 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 JMJD8Q96S16 334 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 HIGD1BQ9P298 99 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 PCNX1Q96RV3 2341 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 MALRD1Q5VYJ5 2156 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 NCKAP5O14513 1909 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 NAV3Q8IVL0 2385 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 SHISA9B4DS77 424 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 H3BMG7 143 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 PLNP26678 52 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 LOXL1Q08397 574 aaPredicted RBP6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 TMEM155Q4W5P6 130 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 SIGLEC15Q6ZMC9 328 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 SRSF8Q9BRL6 282 aaKnown RBP6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 VCX2Q9H322 139 aa6.65□□□□□ -1.34
SMARCA2-246ENST00000635739 TRBV25-1A0A075B6N4 114 aa6.65□□□□□ -1.35
SMARCA2-246ENST00000635739 J3KRW8 73 aa6.65□□□□□ -1.35
SMARCA2-246ENST00000635739 IGHV3-23P01764 117 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms