RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
SSR4P1-203ENST00000599569 C3orf79P0CE67 100 aa12.31□□□□□ -0.44
SSR4P1-203ENST00000599569 GPR183P32249 361 aa12.31□□□□□ -0.44
SSR4P1-203ENST00000599569 PAX8Q06710 450 aa12.31□□□□□ -0.44
SSR4P1-203ENST00000599569 BORCS7Q96B45 105 aa12.31□□□□□ -0.44
SSR4P1-203ENST00000599569 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
SSR4P1-203ENST00000599569 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 CHEK1O14757 476 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 CLEC3BP05452 202 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 HIST2H2BCQ6DN03 193 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 C8orf49Q96NF6 230 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 PAM16Q9Y3D7 125 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 SMAD5-AS1Q9Y6J3 95 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 A0A1B0GUT8 65 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 LINC01548A6NM66 108 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 G3V318 75 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 CT45A10P0DMU9 189 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 RNASEKQ6P5S7 137 aaKnown RBP12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 CCL19Q99731 98 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 C2orf88Q9BSF0 95 aa12.3□□□□□ -0.44
SSR4P1-203ENST00000599569 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
SSR4P1-203ENST00000599569 C5orf56Q8N8D9 126 aa12.29□□□□□ -0.44
SSR4P1-203ENST00000599569 NDFIP1Q9BT67 221 aa12.29□□□□□ -0.44
SSR4P1-203ENST00000599569 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 LOC102724200A0A096LPH7 203 aaPredicted RBP12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 M0R2Z0 102 aa12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 URB1-AS1Q96HZ7 61 aa12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 PSMG3-AS1Q96PY0 264 aa12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 COX8CQ7Z4L0 72 aa12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 ZFAND3Q9H8U3 227 aa12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 SPG11Q96JI7 2443 aa12.28□□□□□ -0.44
SSR4P1-203ENST00000599569 IGKV2-40A0A087WW87 121 aaPredicted RBP12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 FBLL1A6NHQ2 334 aaKnown RBP12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 IGKV2D-40P01614 121 aaPredicted RBP12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 ARMS2P0C7Q2 107 aa12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 RIGQ13278 110 aa12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 Q6AWC8 147 aa12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 CCDC140Q96MF4 163 aa12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.44
SSR4P1-203ENST00000599569 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 IGHG4P01861 327 aa12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 PCP4P48539 62 aa12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 RAB9AP51151 201 aa12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 SAPCD1Q5SSQ6 148 aa12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 MIEN1Q9BRT3 115 aa12.27□□□□□ -0.45
SSR4P1-203ENST00000599569 IGHV4-61A0A0C4DH41 118 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 A0A1B0GV90 55 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 FAM181BA6NEQ2 426 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 BUB3O43684 328 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 CLEC19AQ6UXS0 136 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 PRR25Q96S07 402 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 VPS13CQ709C8 3753 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 ABCA2Q9BZC7 2435 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 IGHV3OR16-10A0A075B7F0 116 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 IGHV1-69DA0A0B4J2H0 117 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 A0A1B0GW15 77 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 IGHV1-69P01742 117 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 TMEM219Q86XT9 240 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 GATD1Q8NB37 220 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 EEF1AKMT3Q96AZ1 226 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 CHCHD1Q96BP2 118 aaKnown RBP12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 MOB4Q9Y3A3 225 aa12.26□□□□□ -0.45
SSR4P1-203ENST00000599569 ZFHX3Q15911 3703 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 TRBV7-1A0A0A6YYK4 115 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 EREGO14944 169 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 IGFL4Q6B9Z1 124 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 EBLN2Q6P2I7 272 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 ZNF705AQ6ZN79 300 aaPredicted RBP12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 PIFOQ8TCI5 191 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 C10orf105Q8TEF2 133 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 SNHG12Q9BXW3 62 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 SH2D1AO60880 128 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 HLA-DMBP28068 263 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 CTRLP40313 264 aa12.25□□□□□ -0.45
SSR4P1-203ENST00000599569 A0A087X0K7 114 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 CLPSL1A2RUU4 121 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 TMEM189A5PLL7 270 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 C2orf70A6NJV1 201 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 M0QZ24 198 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 M0R143 59 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 LINC00614P0C842 121 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 LCN12Q6JVE5 192 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 VGLL1Q99990 258 aa12.24□□□□□ -0.45
SSR4P1-203ENST00000599569 TRAV40A0A0B4J280 105 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 NDUFS8O00217 210 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 RAB4AP20338 218 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 BRD3OSQ6XYD6 125 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 TPPP3Q9BW30 176 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 MEGF9Q9H1U4 602 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 SPATA45Q537H7 98 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 POLQO75417 2590 aa12.23□□□□□ -0.45
SSR4P1-203ENST00000599569 TMEM238LA0A1B0GVL6 79 aa12.22□□□□□ -0.45
SSR4P1-203ENST00000599569 PMCHL1Q16048 86 aa12.22□□□□□ -0.45
SSR4P1-203ENST00000599569 Q8TAT8 98 aa12.22□□□□□ -0.45
SSR4P1-203ENST00000599569 PTPN13Q12923 2485 aa12.22□□□□□ -0.45
SSR4P1-203ENST00000599569 ABCA12Q86UK0 2595 aa12.22□□□□□ -0.45
SSR4P1-203ENST00000599569 TMSB15BA0A087X1C1 80 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms