RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 CXCL2P19875 107 aa10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 BTF3P20290 206 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 S100A7P31151 101 aa10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 TEPPQ6URK8 271 aa10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 ZNF431Q8TF32 576 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 C20orf144Q9BQM9 153 aa10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 SLC50A1Q9BRV3 221 aa10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
CLSTN3-213ENST00000541953 RLN2P04090 185 aa10.6□□□□□ -0.71
CLSTN3-213ENST00000541953 BTCP35070 178 aa10.6□□□□□ -0.71
CLSTN3-213ENST00000541953 C11orf72Q8NBR9 251 aa10.6□□□□□ -0.71
CLSTN3-213ENST00000541953 A0A1W2PPQ1 181 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 SNURFLB1AK76 121 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 NPIPB6E9PJ23 425 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 FNDC10F2Z333 226 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 NDUFB6O95139 128 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 OR4E1P0C645 316 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 BAK1Q16611 211 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 Q6ZQT7 251 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 ZNF546Q86UE3 836 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 SRRQ9GZT4 340 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 GSN-AS1Q9NRJ2 163 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 MGAT4CQ9UBM8 478 aa10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 DMBT1Q9UGM3 2413 aaPredicted RBP10.59□□□□□ -0.71
CLSTN3-213ENST00000541953 C7orf66A4D0T2 115 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 H3BNG1 76 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 M0R3E3 92 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 GOSR2O14653 212 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 COX7A2P2O60397 106 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 XGP55808 180 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 ERCC8Q13216 396 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 IAH1Q2TAA2 248 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 MIC13Q5XKP0 118 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 BPIFA4PQ86YQ2 179 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 CCDC28AQ8IWP9 274 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 OR10P1Q8NGE3 313 aa10.58□□□□□ -0.72
CLSTN3-213ENST00000541953 CCSO14618 274 aa10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 TSC22D2O75157 780 aa10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 MBPP02686 304 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 CD300CQ08708 224 aa10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 DAZ2Q13117 558 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 BTN1A1Q13410 526 aa10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 C10orf113Q5VZT2 155 aa10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 SDHCQ99643 169 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-213ENST00000541953 NOL3O60936 208 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 PRR9Q5T870 116 aa10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 PXDC1Q5TGL8 231 aa10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 DEDD2Q8WXF8 326 aa10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 GSKIPQ9P0R6 139 aa10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 KLF12Q9Y4X4 402 aa10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 PXMP4Q9Y6I8 212 aa10.56□□□□□ -0.72
CLSTN3-213ENST00000541953 SRRM2Q9UQ35 2752 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 EPM2AB3EWF7 344 aa10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 ZNF324O75467 553 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 LEPP41159 167 aa10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 PYGO2Q9BRQ0 406 aa10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
CLSTN3-213ENST00000541953 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 C7orf71A4D174 169 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 KLLNB2CW77 178 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 SIVA1O15304 175 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 NXPH4O95158 308 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 NDUFB4O95168 129 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 IGHV3-53P01767 116 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 CAMLGP49069 296 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 TAS2R30P59541 319 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 C4orf46Q504U0 113 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 NRARPQ7Z6K4 114 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 LYPD1Q8N2G4 141 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
CLSTN3-213ENST00000541953 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
CLSTN3-213ENST00000541953 CST7O76096 145 aa10.53□□□□□ -0.72
CLSTN3-213ENST00000541953 C18orf15Q96N68 181 aa10.53□□□□□ -0.72
CLSTN3-213ENST00000541953 GGACTQ9BVM4 153 aa10.53□□□□□ -0.72
CLSTN3-213ENST00000541953 AGPAT4-IT1Q9H0P7 198 aa10.53□□□□□ -0.72
CLSTN3-213ENST00000541953 DNAJC4Q9NNZ3 241 aa10.53□□□□□ -0.72
CLSTN3-213ENST00000541953 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 SPINK4O60575 86 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 PYYP10082 97 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 S100A5P33763 92 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 HAMPP81172 84 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 Q5VSD8 79 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 S100A7AQ86SG5 101 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 MITD1Q8WV92 249 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 RBM38Q9H0Z9 239 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 WDR83OSQ9Y284 106 aa10.52□□□□□ -0.73
CLSTN3-213ENST00000541953 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
CLSTN3-213ENST00000541953 IGKV2-40A0A087WW87 121 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-213ENST00000541953 IGKV2D-40P01614 121 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-213ENST00000541953 SLC25A5P05141 298 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-213ENST00000541953 INAFM2P0DMQ5 153 aa10.51□□□□□ -0.73
CLSTN3-213ENST00000541953 RNASE4P34096 147 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-213ENST00000541953 TCL1AP56279 114 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms