RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 RALGAPA1Q6GYQ0 2036 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 MYOFQ9NZM1 2061 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 CACNA1EQ15878 2313 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 LINC00473A8K010 186 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 EFNA2O43921 213 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 A4D1N5 150 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 C15orf62A8K5M9 175 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 LYL1P12980 280 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 B4DSR2 109 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 IGLL1P15814 213 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 Q6P435 159 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 RETNQ9HD89 108 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 DOCK4Q8N1I0 1966 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 FAM236AA0A1B0GUQ0 79 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 FAM236BA0A1B0GV22 79 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 PFN1P07737 140 aaKnown RBP8.07□□□□□ -1.12
COL4A6-208ENST00000538570 C20orf204Q6ZNR8 217 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 SH2D6Q7Z4S9 175 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 SPACA3Q8IXA5 215 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 PNRC2Q9NPJ4 139 aaKnown RBP8.07□□□□□ -1.12
COL4A6-208ENST00000538570 ARID2Q68CP9 1835 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 TMEM105Q8N8V8 129 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 RNF166Q96A37 237 aaPredicted RBP8.07□□□□□ -1.12
COL4A6-208ENST00000538570 RHPN1-AS1Q9BWJ2 59 aa8.07□□□□□ -1.12
COL4A6-208ENST00000538570 COX8AP10176 69 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 KLHL30-AS1Q8NEE0 82 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 PLXNA1Q9UIW2 1896 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 PSME4Q14997 1843 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 RNASE2P10153 161 aaKnown RBP8.06□□□□□ -1.12
COL4A6-208ENST00000538570 BRD3OSQ6XYD6 125 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 C18orf32Q8TCD1 76 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 LY6DQ14210 128 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 C10orf91Q5T1B1 145 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 AMTNQ6UX39 209 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 CEND1Q8N111 149 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 UBL5Q9BZL1 73 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 BRCA1P38398 1863 aaKnown RBP8.06□□□□□ -1.12
COL4A6-208ENST00000538570 NTN3O00634 580 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-208ENST00000538570 IGHG4P01861 327 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 PDE6HQ13956 83 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
COL4A6-208ENST00000538570 ATOX1O00244 68 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 MMP23AO75900 390 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 MORN5Q5VZ52 161 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 TMEM75Q8N9X5 138 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 PTH2Q96A98 100 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 CNOT1A5YKK6 2376 aaKnown RBP8.05□□□□□ -1.12
COL4A6-208ENST00000538570 CEP250Q9BV73 2442 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 HOXD3P31249 432 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-208ENST00000538570 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 PRB1P04280 392 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 ARMS2P0C7Q2 107 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 DEFB121Q5J5C9 76 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 KLF2Q9Y5W3 355 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-208ENST00000538570 DAD1P61803 113 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 SUMO4Q6EEV6 95 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 DAZ1Q9NQZ3 744 aaKnown RBP8.05□□□□□ -1.12
COL4A6-208ENST00000538570 M0QXV9 152 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 Q6ZS49 121 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 EP300Q09472 2414 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-208ENST00000538570 ESPL1Q14674 2120 aa8.05□□□□□ -1.12
COL4A6-208ENST00000538570 A0A1B0GX51 115 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 NTN5Q8WTR8 489 aaPredicted RBP8.04□□□□□ -1.12
COL4A6-208ENST00000538570 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 PRB2P02812 416 aaPredicted RBP8.04□□□□□ -1.12
COL4A6-208ENST00000538570 HAMPP81172 84 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 OR11H6Q8NGC7 330 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 SPANXB1Q9NS25 103 aaPredicted RBP8.04□□□□□ -1.12
COL4A6-208ENST00000538570 ZNF492Q9P255 531 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 TP53TG1Q9Y2A0 90 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 LOC285556D6RIA3 1793 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 QRFPP83859 136 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 IL17RELQ6ZVW7 336 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 C5orf24Q7Z6I8 188 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 MSRB2Q9Y3D2 182 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 RALGAPA2Q2PPJ7 1873 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 IGKV1D-17A0A075B6S4 117 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 C20orf173Q96LM9 149 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 CARD19Q96LW7 228 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 GBF1Q92538 1859 aa8.04□□□□□ -1.12
COL4A6-208ENST00000538570 DEFB130BP0DP73 79 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 DEFB130AP0DP74 79 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 PRSS46E5RG02 174 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 FGF6P10767 208 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 BAALCQ8WXS3 180 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 IGHV1-24A0A0C4DH33 117 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 A0A0G2JNJ9 132 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 A0A0G2JRQ6 117 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 ZNF561-AS1K7EIQ3 104 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 RHODO00212 210 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 LINC00479Q96M42 142 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 Q9UFV3 132 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 SPTBN2O15020 2390 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 C5orf63A6NC05 138 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 DKK1O94907 266 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 LINC00205P59089 165 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 MLANAQ16655 118 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 Q8N8P6 123 aa8.03□□□□□ -1.12
COL4A6-208ENST00000538570 TMEM213A2RRL7 107 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 I3L3M4 83 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms