RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.43□□□□□ -0.9
U2AF1-209ENST00000475639 BVES-AS1Q5T3Y7 98 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 VDAC2P45880 294 aaPredicted RBP9.43□□□□□ -0.9
U2AF1-209ENST00000475639 TMEM14EPQ6UXP3 125 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 PRSS57Q6UWY2 283 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 RPRMLQ8N4K4 120 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 C17orf100A8MU93 164 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 FAM27E3Q08E93 113 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 FAM201AQ5SY85 155 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 COLCA1Q6ZS62 124 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 NEGR1Q7Z3B1 354 aa9.43□□□□□ -0.9
U2AF1-209ENST00000475639 C15orf61A6NNL5 157 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 C1QTNF4Q9BXJ3 329 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 A0A0G2JMM0 328 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 A0A1W2PPB8 328 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 KIR3DP1A8MWS1 328 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 RAMP3O60896 148 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 ERCC8Q13216 396 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 PMVKQ15126 192 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 Q6ZS49 121 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 A0A1W2PQF6 199 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 G3V4G9 280 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 LTBRP36941 435 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 EFNB3Q15768 340 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 CHAC1Q9BUX1 264 aa9.42□□□□□ -0.9
U2AF1-209ENST00000475639 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 SS18Q15532 418 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 PSG3Q16557 428 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 CCL3L1P16619 93 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 SRXN1Q9BYN0 137 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 TMEM133Q9H2Q1 129 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 IGLC1P0CG04 106 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
U2AF1-209ENST00000475639 SRRM4A7MD48 611 aaKnown RBP9.41□□□□□ -0.9
U2AF1-209ENST00000475639 PRCDQ00LT1 54 aa9.4□□□□□ -0.9
U2AF1-209ENST00000475639 TRBV20-1A0A075B6N2 111 aa9.4□□□□□ -0.9
U2AF1-209ENST00000475639 D6R8Y8 96 aa9.4□□□□□ -0.9
U2AF1-209ENST00000475639 A0A087X0K7 114 aa9.4□□□□□ -0.9
U2AF1-209ENST00000475639 ZNF138P52744 262 aa9.4□□□□□ -0.9
U2AF1-209ENST00000475639 RBM3P98179 157 aaKnown RBP9.4□□□□□ -0.9
U2AF1-209ENST00000475639 LSM4Q9Y4Z0 139 aaKnown RBP9.4□□□□□ -0.9
U2AF1-209ENST00000475639 V9GYV3 84 aa9.4□□□□□ -0.9
U2AF1-209ENST00000475639 CFAP54Q96N23 3096 aa9.4□□□□□ -0.91
U2AF1-209ENST00000475639 ADAMTSL5Q6ZMM2 481 aa9.4□□□□□ -0.91
U2AF1-209ENST00000475639 C9orf139Q6ZV77 190 aa9.4□□□□□ -0.91
U2AF1-209ENST00000475639 FOXL2NBQ6ZUU3 175 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 CRIM1Q9NZV1 1036 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 PMS2P5A8MQ11 134 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 SIGLEC15Q6ZMC9 328 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 Q8N7P7 452 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 SMRP1Q8NCR6 262 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 VWCEQ96DN2 955 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 FAM208BQ5VWN6 2430 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 NACAE9PAV3 2078 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 COL6A3P12111 3177 aa9.39□□□□□ -0.91
U2AF1-209ENST00000475639 IGLV2-14P01704 120 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 COX6A1P12074 109 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 C11orf44Q8N8P7 122 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 DEPPQ9NTK1 212 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 ACACBO00763 2458 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 SPG11Q96JI7 2443 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 SAA2P0DJI9 122 aaPredicted RBP9.38□□□□□ -0.91
U2AF1-209ENST00000475639 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 UTF1Q5T230 341 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 NABP1Q96AH0 204 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 COL5A1P20908 1838 aaPredicted RBP9.38□□□□□ -0.91
U2AF1-209ENST00000475639 LINC00271P0C7V0 271 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 BSPH1Q075Z2 132 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 SRSF7Q16629 238 aaKnown RBP eCLIP9.38□□□□□ -0.91
U2AF1-209ENST00000475639 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
U2AF1-209ENST00000475639 OTOGLQ3ZCN5 2332 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 C20orf204Q6ZNR8 217 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 SLC25A45Q8N413 288 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 FDCSPQ8NFU4 85 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 C18orf32Q8TCD1 76 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 SPXQ9BT56 116 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 C1QTNF5Q9BXJ0 243 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 SLAQ13239 276 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 EXPH5Q8NEV8 1989 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 hDV102S1A0JD36 115 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 ZNF561-AS1K7EIQ3 104 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 IGHG3P01860 377 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 UFSP1Q6NVU6 142 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 SYS1-DBNDD2H3BUS1 97 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 TRACP01848 142 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 TCRAP04437 139 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 SRD5A1P18405 259 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 ZNF474Q6S9Z5 364 aaPredicted RBP9.37□□□□□ -0.91
U2AF1-209ENST00000475639 LAMA1P25391 3075 aa9.37□□□□□ -0.91
U2AF1-209ENST00000475639 CD24P25063 80 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 KLF5Q13887 457 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms