RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 NUDT10Q8NFP7 164 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 NUDT11Q96G61 164 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 ZNF586Q9NXT0 402 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 ZNF580Q9UK33 172 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 I3L2K1 104 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 BMPR1BO00238 502 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 FRMD6-AS1P0C7T7 363 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 IGLC1P0CG04 106 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 CFHR3Q02985 330 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 OTORQ9NRC9 128 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 MRPL27Q9P0M9 148 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 RNF24Q9Y225 148 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 RNF114Q9Y508 228 aa13.98□□□□□ -0.17
ATPAF2-202ENST00000462733 TRBV6-1A0A0K0K1D8 114 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 CLPSL1A2RUU4 121 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 PGPA6NDG6 321 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 KRTAP24-1Q3LI83 254 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 MRPL54Q6P161 138 aaKnown RBP13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 KLHDC1Q8N7A1 406 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 NHLRC2Q8NBF2 726 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 C20orf144Q9BQM9 153 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 MLST8Q9BVC4 326 aa13.97□□□□□ -0.17
ATPAF2-202ENST00000462733 LTAP01374 205 aa13.96□□□□□ -0.17
ATPAF2-202ENST00000462733 GPX1P07203 203 aa13.96□□□□□ -0.17
ATPAF2-202ENST00000462733 LCNL1Q6ZST4 164 aa13.96□□□□□ -0.17
ATPAF2-202ENST00000462733 TRAV34A0A0B4J273 112 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 ZNF705FA8MVS1 300 aaPredicted RBP13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 OR2J3O76001 311 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 ZNF705DP0CH99 300 aaPredicted RBP13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 ZNF705BP0CI00 300 aaPredicted RBP13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 PF4V1P10720 104 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 GNG5P63218 68 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 SPINK4O60575 86 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 ZNF253O75346 499 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 TCRAP04437 139 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 SRIP30626 198 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 TOMM20LQ6UXN7 152 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 NUP35Q8NFH5 326 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 BLNKQ8WV28 456 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 FANCD2OSQ96PS1 177 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 GFRA4Q9GZZ7 299 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 Q9H3A6 140 aa13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 RPP21Q9H633 154 aaKnown RBP13.95□□□□□ -0.18
ATPAF2-202ENST00000462733 F2Z2F3 143 aa13.94□□□□□ -0.18
ATPAF2-202ENST00000462733 IGLV1-40P01703 118 aa13.94□□□□□ -0.18
ATPAF2-202ENST00000462733 IGHG4P01861 327 aa13.94□□□□□ -0.18
ATPAF2-202ENST00000462733 PSG1P11464 419 aa13.94□□□□□ -0.18
ATPAF2-202ENST00000462733 KLF5Q13887 457 aaPredicted RBP13.94□□□□□ -0.18
ATPAF2-202ENST00000462733 S100A7AQ86SG5 101 aa13.94□□□□□ -0.18
ATPAF2-202ENST00000462733 KLK15Q9H2R5 256 aa13.94□□□□□ -0.18
ATPAF2-202ENST00000462733 IGLV11-55A0A075B6I3 123 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 A0A1B0GXF2 115 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 FAM231BA6NCW3 169 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 A8MWL6 223 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 CA1P00915 261 aaPredicted RBP13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 TRGV3P03979 118 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 PROK1P58294 105 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 NEU1Q99519 415 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 SLC25A39Q9BZJ4 359 aaPredicted RBP13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 IGHV3-21A0A0B4J1V1 117 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 ZNF324O75467 553 aaPredicted RBP13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 PSMB8P28062 276 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 LYZP61626 148 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 RHOGP84095 191 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 C11orf44Q8N8P7 122 aa13.93□□□□□ -0.18
ATPAF2-202ENST00000462733 FBN1P35555 2871 aaKnown RBP13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 A0A1W2PS18 150 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 TMEM89A2RUT3 159 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 C19orf71A6NCJ1 209 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 H3BUA1 57 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 AMTP48728 403 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 RAB9AP51151 201 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 FAM162BQ5T6X4 162 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 HIST2H2BDQ6DRA6 164 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 PRR27Q6MZM9 219 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 LYPD1Q8N2G4 141 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 OR4B1Q8NGF8 309 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 FBXL7Q9UJT9 491 aa13.92□□□□□ -0.18
ATPAF2-202ENST00000462733 TRAV30A0A087WSZ9 112 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 HIGD1CA8MV81 97 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 K7EIM0 57 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 NDUFB8O95169 186 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 IGKV1-17P01599 117 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 RPLP1P05386 114 aaKnown RBP13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 ELANEP08246 267 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 SLAQ13239 276 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 FOXE3Q13461 319 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 KIAA1644Q3SXP7 199 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 Q86TA4 180 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 OR4X2Q8NGF9 303 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 C18orf32Q8TCD1 76 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 SHANK2-AS3Q9BTD1 123 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 VAMP8Q9BV40 100 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 NRN1Q9NPD7 142 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 THYN1Q9P016 225 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 S4R3C0 116 aa13.91□□□□□ -0.18
ATPAF2-202ENST00000462733 P01737 135 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 NPIPB6E9PJ23 425 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 H3BRN7 92 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms