RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 KIR2DL5BQ8NHK3 375 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 CSTL1Q9H114 145 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 AAMDCQ9H7C9 122 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 AGRNO00468 2067 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 BOLA2-SMG1P6H3BVE0 249 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 M0R3E3 92 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 ZNF705DP0CH99 300 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-221ENST00000462352 ZNF705BP0CI00 300 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-221ENST00000462352 FGF8P55075 233 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-221ENST00000462352 RANP62826 216 aaKnown RBP8.66□□□□□ -1.02
CPNE1-221ENST00000462352 ICAM4Q14773 271 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 DPPA3Q6W0C5 159 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 IQCF2Q8IXL9 164 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 LYPD1Q8N2G4 141 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 OR4B1Q8NGF8 309 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 OR8A1Q8NGG7 326 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 SUN5Q8TC36 379 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 MRPL53Q96EL3 112 aaKnown RBP8.66□□□□□ -1.02
CPNE1-221ENST00000462352 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 Q9H3A6 140 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 PRELID1Q9Y255 219 aa8.66□□□□□ -1.02
CPNE1-221ENST00000462352 DUSP14O95147 198 aaKnown RBP8.65□□□□□ -1.02
CPNE1-221ENST00000462352 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
CPNE1-221ENST00000462352 NHLRC4P0CG21 123 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-221ENST00000462352 CNN1P51911 297 aaKnown RBP8.65□□□□□ -1.02
CPNE1-221ENST00000462352 HIST1H1AQ02539 215 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-221ENST00000462352 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-221ENST00000462352 CLUHP3Q96NS8 147 aa8.65□□□□□ -1.02
CPNE1-221ENST00000462352 TMPRSS5Q9H3S3 457 aa8.65□□□□□ -1.02
CPNE1-221ENST00000462352 A8MTW9 85 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 UBE2CO00762 179 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 CA1P00915 261 aaPredicted RBP8.64□□□□□ -1.03
CPNE1-221ENST00000462352 SULT1A2P50226 295 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 RAB5CP51148 216 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 SFT2D1Q8WV19 159 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 SPATA25Q9BR10 227 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
CPNE1-221ENST00000462352 HUWE1Q7Z6Z7 4374 aaKnown RBP8.63□□□□□ -1.03
CPNE1-221ENST00000462352 PGPA6NDG6 321 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 GIG44P09565 113 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-221ENST00000462352 H2AFB1P0C5Y9 115 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 NUTF2P61970 127 aaKnown RBP8.63□□□□□ -1.03
CPNE1-221ENST00000462352 DEFB135Q30KP9 77 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 FAM74A1Q5RGS3 127 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 ALKAL2Q6UX46 152 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 Q6ZWC4 215 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 OR10J6PQ8NGY7 276 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 SLC35B3Q9H1N7 401 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 RETNQ9HD89 108 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 TGP01266 2768 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 NBEAL2Q6ZNJ1 2754 aa8.63□□□□□ -1.03
CPNE1-221ENST00000462352 A0A1B0GV50 99 aa8.62□□□□□ -1.03
CPNE1-221ENST00000462352 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
CPNE1-221ENST00000462352 CSN1S1P47710 185 aa8.62□□□□□ -1.03
CPNE1-221ENST00000462352 FXYD7P58549 80 aa8.62□□□□□ -1.03
CPNE1-221ENST00000462352 RXFP4Q8TDU9 374 aa8.62□□□□□ -1.03
CPNE1-221ENST00000462352 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
CPNE1-221ENST00000462352 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 IGKV2-40A0A087WW87 121 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-221ENST00000462352 A0A1W2PRE2 83 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 IGKV2D-40P01614 121 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-221ENST00000462352 UBE2G2P60604 165 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 SUMO1P63165 101 aaKnown RBP8.61□□□□□ -1.03
CPNE1-221ENST00000462352 ERCC8Q13216 396 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 CMTM2Q8TAZ6 248 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 RNF183Q96D59 192 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 OVOL2Q9BRP0 275 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 C1QTNF4Q9BXJ3 329 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 PPP1R14DQ9NXH3 145 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 TP53TG1Q9Y2A0 90 aa8.61□□□□□ -1.03
CPNE1-221ENST00000462352 YTHDF2Q9Y5A9 579 aaKnown RBP8.61□□□□□ -1.03
CPNE1-221ENST00000462352 FAM74A7A6NL05 159 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 DIRC3C9JPN6 131 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 M0R2Z0 102 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 SPRY2O43597 315 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 SLC25A5P05141 298 aaKnown RBP8.6□□□□□ -1.03
CPNE1-221ENST00000462352 CT45A10P0DMU9 189 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 GNG5P63218 68 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 ARL6IP6Q8N6S5 226 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 LINC00477Q96M19 166 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 RCHY1Q96PM5 261 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 VGLL1Q99990 258 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 AGPAT4-IT1Q9H0P7 198 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 RPH3ALQ9UNE2 315 aa8.6□□□□□ -1.03
CPNE1-221ENST00000462352 TRAV1-1A0A0B4J248 108 aa8.59□□□□□ -1.03
CPNE1-221ENST00000462352 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
CPNE1-221ENST00000462352 ZNF705EA8MWA4 302 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-221ENST00000462352 AMBPP02760 352 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms