RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 IGHV3-23P01764 117 aa14.35□□□□□ -0.11
SEMA3B-209ENST00000456560 KLK9Q2XQG4 91 aa14.35□□□□□ -0.11
SEMA3B-209ENST00000456560 C1RLQ9NZP8 487 aa14.35□□□□□ -0.11
SEMA3B-209ENST00000456560 KLK9Q9UKQ9 250 aa14.35□□□□□ -0.11
SEMA3B-209ENST00000456560 SH2D7A6NKC9 451 aaPredicted RBP14.34□□□□□ -0.11
SEMA3B-209ENST00000456560 M0R3E3 92 aa14.34□□□□□ -0.11
SEMA3B-209ENST00000456560 CRIP1P50238 77 aa14.34□□□□□ -0.11
SEMA3B-209ENST00000456560 FAM162BQ5T6X4 162 aa14.34□□□□□ -0.11
SEMA3B-209ENST00000456560 ASCL2Q99929 193 aa14.34□□□□□ -0.11
SEMA3B-209ENST00000456560 FLNCQ14315 2725 aa14.34□□□□□ -0.11
SEMA3B-209ENST00000456560 OR2T8A6NH00 312 aa14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 C19orf84I3L1E1 186 aa14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 M0QZ24 198 aa14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 ZNF843Q8N446 348 aa14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 OR4C46A6NHA9 309 aa14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 PRB4P10163 310 aaPredicted RBP14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 FAM110DQ8TAY7 271 aaPredicted RBP14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 RNASE8Q8TDE3 154 aaKnown RBP14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 AAMDCQ9H7C9 122 aa14.33□□□□□ -0.12
SEMA3B-209ENST00000456560 PSG9Q00887 426 aa14.32□□□□□ -0.12
SEMA3B-209ENST00000456560 BPESC1Q9GZL8 116 aa14.32□□□□□ -0.12
SEMA3B-209ENST00000456560 LOC102724200A0A096LPH7 203 aaPredicted RBP14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 RPL7P18124 248 aaKnown RBP14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 SAA4P35542 130 aa14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 NDFIP1Q9BT67 221 aa14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 CHD6Q8TD26 2715 aa14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 IGHV1-24A0A0C4DH33 117 aa14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 SERTM2A0A1B0GWG4 89 aa14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 SCGB2A1O75556 95 aa14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 ARL6IP6Q8N6S5 226 aa14.31□□□□□ -0.12
SEMA3B-209ENST00000456560 MYO18BQ8IUG5 2567 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 CHEK1O14757 476 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 GATD1Q8NB37 220 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 CHCHD1Q96BP2 118 aaKnown RBP14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 C8orf49Q96NF6 230 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 ST20Q9HBF5 79 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 TP73-AS1Q9UF72 201 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 SMAD5-AS1Q9Y6J3 95 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 WNK2Q9Y3S1 2297 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 SYS1-DBNDD2H3BUS1 97 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 LINC00173Q6ZV60 143 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 ZNF502Q8TBZ5 544 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 RABAC1Q9UI14 185 aa14.3□□□□□ -0.12
SEMA3B-209ENST00000456560 A0A1B0GUT8 65 aa14.29□□□□□ -0.12
SEMA3B-209ENST00000456560 LEPROTL1O95214 131 aa14.29□□□□□ -0.12
SEMA3B-209ENST00000456560 CSN1S1P47710 185 aa14.29□□□□□ -0.12
SEMA3B-209ENST00000456560 hDV102S1A0JD36 115 aa14.29□□□□□ -0.12
SEMA3B-209ENST00000456560 CRXO43186 299 aaPredicted RBP14.29□□□□□ -0.12
SEMA3B-209ENST00000456560 COX8CQ7Z4L0 72 aa14.29□□□□□ -0.12
SEMA3B-209ENST00000456560 TMUB1Q9BVT8 246 aa14.29□□□□□ -0.12
SEMA3B-209ENST00000456560 SPTAN1Q13813 2472 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-209ENST00000456560 ATP6V0E1O15342 81 aa14.28□□□□□ -0.12
SEMA3B-209ENST00000456560 ARMS2P0C7Q2 107 aa14.28□□□□□ -0.12
SEMA3B-209ENST00000456560 RBX1P62877 108 aa14.28□□□□□ -0.12
SEMA3B-209ENST00000456560 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
SEMA3B-209ENST00000456560 OR4C5Q8NGB2 326 aa14.28□□□□□ -0.12
SEMA3B-209ENST00000456560 KMT2BQ9UMN6 2715 aaPredicted RBP14.28□□□□□ -0.12
SEMA3B-209ENST00000456560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.27□□□□□ -0.12
SEMA3B-209ENST00000456560 CENPVL3A0A0U1RRI6 287 aa14.27□□□□□ -0.12
SEMA3B-209ENST00000456560 K7EP13 123 aa14.27□□□□□ -0.12
SEMA3B-209ENST00000456560 NPFFO15130 113 aa14.27□□□□□ -0.12
SEMA3B-209ENST00000456560 RIGQ13278 110 aa14.27□□□□□ -0.12
SEMA3B-209ENST00000456560 MPV17L2Q567V2 206 aa14.27□□□□□ -0.12
SEMA3B-209ENST00000456560 IGHG4P01861 327 aa14.27□□□□□ -0.13
SEMA3B-209ENST00000456560 VAMP3Q15836 100 aa14.27□□□□□ -0.13
SEMA3B-209ENST00000456560 ECSCRQ19T08 205 aa14.27□□□□□ -0.13
SEMA3B-209ENST00000456560 C15orf32Q32M92 178 aa14.27□□□□□ -0.13
SEMA3B-209ENST00000456560 MED13LQ71F56 2210 aa14.27□□□□□ -0.13
SEMA3B-209ENST00000456560 USP9XQ93008 2570 aaPredicted RBP14.27□□□□□ -0.13
SEMA3B-209ENST00000456560 A0A1B0GW15 77 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 RHOGP84095 191 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 Q6AWC8 147 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 TMEM191AQ9H0A3 160 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 IGKV2-40A0A087WW87 121 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 HSBP1L1C9JCN9 74 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 IGKV2D-40P01614 121 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 IGHV4-39P01824 125 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 CT45A10P0DMU9 189 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 ZFAND3Q9H8U3 227 aa14.26□□□□□ -0.13
SEMA3B-209ENST00000456560 LINC01548A6NM66 108 aa14.25□□□□□ -0.13
SEMA3B-209ENST00000456560 GPR183P32249 361 aa14.25□□□□□ -0.13
SEMA3B-209ENST00000456560 SLC25A34Q6PIV7 304 aa14.25□□□□□ -0.13
SEMA3B-209ENST00000456560 FBLL1A6NHQ2 334 aaKnown RBP14.25□□□□□ -0.13
SEMA3B-209ENST00000456560 S100A7P31151 101 aa14.25□□□□□ -0.13
SEMA3B-209ENST00000456560 SAPCD1Q5SSQ6 148 aa14.25□□□□□ -0.13
SEMA3B-209ENST00000456560 ERASQ7Z444 233 aa14.25□□□□□ -0.13
SEMA3B-209ENST00000456560 SH2D1AO60880 128 aa14.24□□□□□ -0.13
SEMA3B-209ENST00000456560 NUDT3O95989 172 aa14.24□□□□□ -0.13
SEMA3B-209ENST00000456560 CLEC3BP05452 202 aa14.24□□□□□ -0.13
SEMA3B-209ENST00000456560 ZNF138P52744 262 aa14.24□□□□□ -0.13
SEMA3B-209ENST00000456560 PRR25Q96S07 402 aa14.24□□□□□ -0.13
SEMA3B-209ENST00000456560 MAP1LC3CQ9BXW4 147 aa14.24□□□□□ -0.13
SEMA3B-209ENST00000456560 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 IGHV3-35A0A0C4DH35 117 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 G3V318 75 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 PAX8Q06710 450 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 TMEM189A5PLL7 270 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 H0Y8G0 127 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 OR5AL1P0C617 328 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 ZNF493Q6ZR52 646 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms