RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 C7orf69Q9H7B7 122 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 PATE3B3GLJ2 98 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 TIAF1O95411 115 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 PAQR4Q8N4S7 273 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-209ENST00000437951 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 LCTP09848 1927 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 A0A0A6YYD4 124 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 PFN1P07737 140 aaKnown RBP9.44□□□□□ -0.9
PTCH1-209ENST00000437951 WNT2P09544 360 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 C14orf178Q8N769 122 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-209ENST00000437951 FAM216BQ8N7L0 139 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 NRTNQ99748 197 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 TIMM23O14925 209 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 NDUFB8O95169 186 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 HERVK_113P63121 156 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 Q6ZVH6 145 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 C12orf74Q32Q52 190 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 SORL1Q92673 2214 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 CTSBP07858 339 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 C2orf66Q6UXQ4 117 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 PYGO2Q9BRQ0 406 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
PTCH1-209ENST00000437951 A0A1W2PR77 199 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 IGLC7A0M8Q6 106 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 DEFB125Q8N687 156 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 IGFBPL1Q8WX77 278 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 IGLV3-32A0A0A0MS00 114 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 IGLL1P15814 213 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 C15orf32Q32M92 178 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 CDCP2Q5VXM1 449 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 CREBBPQ92793 2442 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 KIR2DL5BA0A0G2JN68 375 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 KIR2DL5BA0A0G2JPC4 375 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 BSPH1Q075Z2 132 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 KIR2DL5AQ8N109 375 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 SLC22A18ASQ8N1D0 253 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 C20orf78Q9BR46 151 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 SCN10AQ9Y5Y9 1956 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 TRBV25-1A0A075B6N4 114 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 IL15RAQ13261 267 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 A0A1W2PPI3 338 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 CELA2AP08217 269 aa9.42□□□□□ -0.9
PTCH1-209ENST00000437951 MST1P26927 711 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 SPG11Q96JI7 2443 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 CELA3AP09093 270 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 C3orf56Q8N813 242 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 TMEM131Q92545 1883 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 NTN3O00634 580 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-209ENST00000437951 TAX1BP3O14907 124 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTCH1-209ENST00000437951 HERV-K104P63124 156 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 KLF5Q13887 457 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-209ENST00000437951 NSUN5P1Q3KNT7 163 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 LYZL4Q96KX0 146 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 GFI1Q99684 422 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 IGKV1-9A0A0C4DH69 117 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 LCNL1Q6ZST4 164 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
PTCH1-209ENST00000437951 WIPF2Q8TF74 440 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-209ENST00000437951 SHANK2-AS3Q9BTD1 123 aa9.4□□□□□ -0.9
PTCH1-209ENST00000437951 SIPA1L1O43166 1804 aa9.4□□□□□ -0.9
PTCH1-209ENST00000437951 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.9
PTCH1-209ENST00000437951 FOXI2Q6ZQN5 318 aa9.4□□□□□ -0.9
PTCH1-209ENST00000437951 C4orf51C9J302 202 aa9.4□□□□□ -0.91
PTCH1-209ENST00000437951 TEN1Q86WV5 123 aa9.4□□□□□ -0.91
PTCH1-209ENST00000437951 TICRRQ7Z2Z1 1910 aa9.4□□□□□ -0.91
PTCH1-209ENST00000437951 CFC1BP0CG36 223 aa9.4□□□□□ -0.91
PTCH1-209ENST00000437951 CFC1P0CG37 223 aa9.4□□□□□ -0.91
PTCH1-209ENST00000437951 SVIPQ8NHG7 77 aa9.4□□□□□ -0.91
PTCH1-209ENST00000437951 V9GYY9 64 aa9.4□□□□□ -0.91
PTCH1-209ENST00000437951 DSCR9P59020 149 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 A0A1B0GX51 115 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 H0YGX0 51 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 BAALC-AS2P0C853 105 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 PSMB8P28062 276 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 FXYD7P58549 80 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 RPL15P61313 204 aaKnown RBP9.39□□□□□ -0.91
PTCH1-209ENST00000437951 SELENOKQ9Y6D0 94 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 CEP192Q8TEP8 1941 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 WFDC9Q8NEX5 89 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 J3QQQ9 107 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 IGHV3-11P01762 117 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 NTF4P34130 210 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 LINC01560Q8TB33 94 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 A0A0G2JMZ2 1700 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 LRRC37A2A6NM11 1700 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 LRRC37AA6NMS7 1700 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 IGHV1-2P23083 117 aa9.39□□□□□ -0.91
PTCH1-209ENST00000437951 IGKV1-5P01602 117 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 ZCCHC24Q8N2G6 241 aaKnown RBP9.38□□□□□ -0.91
PTCH1-209ENST00000437951 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 IGKV1D-43A0A0B4J1Z2 117 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 ADAMTSL1Q8N6G6 1762 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms