RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C15orf32Q32M92 178 aa14.46□□□□□ -0.1
CLK1-205ENST00000434813 CYB5R2Q6BCY4 276 aa14.46□□□□□ -0.1
CLK1-205ENST00000434813 LCN12Q6JVE5 192 aa14.46□□□□□ -0.1
CLK1-205ENST00000434813 UNQ5815/PRO19632Q6UWF5 114 aa14.46□□□□□ -0.1
CLK1-205ENST00000434813 IGLC3P0DOY3 106 aa14.45□□□□□ -0.1
CLK1-205ENST00000434813 PLA2G2AP14555 144 aa14.45□□□□□ -0.1
CLK1-205ENST00000434813 UQCR10Q9UDW1 63 aa14.45□□□□□ -0.1
CLK1-205ENST00000434813 SMAD5-AS1Q9Y6J3 95 aa14.45□□□□□ -0.1
CLK1-205ENST00000434813 MYO18BQ8IUG5 2567 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 IGKV2-40A0A087WW87 121 aaPredicted RBP14.44□□□□□ -0.1
CLK1-205ENST00000434813 NPFFO15130 113 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 IGKV2D-40P01614 121 aaPredicted RBP14.44□□□□□ -0.1
CLK1-205ENST00000434813 LINC00614P0C842 121 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 GPR183P32249 361 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 SAPCD1Q5SSQ6 148 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 KLHDC1Q8N7A1 406 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 TMEM70Q9BUB7 260 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 J3QKU1 62 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 RHOGP84095 191 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 ZFAND3Q9H8U3 227 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 CLEC5AQ9NY25 188 aa14.44□□□□□ -0.1
CLK1-205ENST00000434813 FLNCQ14315 2725 aa14.43□□□□□ -0.1
CLK1-205ENST00000434813 CENPVL3A0A0U1RRI6 287 aa14.43□□□□□ -0.1
CLK1-205ENST00000434813 CRXO43186 299 aaPredicted RBP14.43□□□□□ -0.1
CLK1-205ENST00000434813 SH2D1AO60880 128 aa14.43□□□□□ -0.1
CLK1-205ENST00000434813 PRR25Q96S07 402 aa14.43□□□□□ -0.1
CLK1-205ENST00000434813 WNK2Q9Y3S1 2297 aa14.43□□□□□ -0.1
CLK1-205ENST00000434813 RAB9AP51151 201 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 ZNF493Q6ZR52 646 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 ATOH7Q8N100 152 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 CCL19Q99731 98 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 DOPEY1Q5JWR5 2465 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 TRAV9-2A0A087WT02 112 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 C20orf202A1L168 122 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 TMEM189A5PLL7 270 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 IGHG4P01861 327 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 RELQ04864 619 aaPredicted RBP14.42□□□□□ -0.1
CLK1-205ENST00000434813 SPOCK3Q9BQ16 436 aa14.42□□□□□ -0.1
CLK1-205ENST00000434813 A0A087X0K7 114 aa14.41□□□□□ -0.1
CLK1-205ENST00000434813 TCAPO15273 167 aa14.41□□□□□ -0.1
CLK1-205ENST00000434813 RPLP1P05386 114 aaKnown RBP14.41□□□□□ -0.1
CLK1-205ENST00000434813 CCDC140Q96MF4 163 aa14.41□□□□□ -0.1
CLK1-205ENST00000434813 LEPROTL1O95214 131 aa14.41□□□□□ -0.1
CLK1-205ENST00000434813 OR5AL1P0C617 328 aa14.41□□□□□ -0.1
CLK1-205ENST00000434813 SPATA12Q7Z6I5 190 aa14.41□□□□□ -0.1
CLK1-205ENST00000434813 TPPP3Q9BW30 176 aa14.41□□□□□ -0.1
CLK1-205ENST00000434813 SPTAN1Q13813 2472 aaKnown RBP14.4□□□□□ -0.1
CLK1-205ENST00000434813 CLEC3BP05452 202 aa14.4□□□□□ -0.1
CLK1-205ENST00000434813 MAJINQ3KP22 176 aa14.4□□□□□ -0.1
CLK1-205ENST00000434813 C5orf56Q8N8D9 126 aa14.4□□□□□ -0.1
CLK1-205ENST00000434813 IGHV3OR16-8A0A075B7F1 116 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 IGHV3-35A0A0C4DH35 117 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 BUB3O43684 328 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 IGHV4-39P01824 125 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 G3V318 75 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 SYS1-DBNDD2H3BUS1 97 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 LYZL1Q6UWQ5 148 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 Q8TAT8 98 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 EEF1AKMT3Q96AZ1 226 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 VGLL1Q99990 258 aa14.39□□□□□ -0.11
CLK1-205ENST00000434813 USP9XQ93008 2570 aaPredicted RBP14.38□□□□□ -0.11
CLK1-205ENST00000434813 HLA-DMBP28068 263 aa14.38□□□□□ -0.11
CLK1-205ENST00000434813 RPS20P60866 119 aaKnown RBP14.38□□□□□ -0.11
CLK1-205ENST00000434813 Q6ZN92 141 aa14.38□□□□□ -0.11
CLK1-205ENST00000434813 TMSB15BA0A087X1C1 80 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 BMI1P35226 326 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 HNRNPA3P51991 378 aaKnown RBP14.37□□□□□ -0.11
CLK1-205ENST00000434813 LINC00173Q6ZV60 143 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 UBR5O95071 2799 aaPredicted RBP14.37□□□□□ -0.11
CLK1-205ENST00000434813 TRBV7-1A0A0A6YYK4 115 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 CLPSL1A2RUU4 121 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 LINC01548A6NM66 108 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 ZNF138P52744 262 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 SRSF2Q01130 221 aaKnown RBP14.37□□□□□ -0.11
CLK1-205ENST00000434813 PAX8Q06710 450 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 IGFL4Q6B9Z1 124 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 CLEC19AQ6UXS0 136 aa14.37□□□□□ -0.11
CLK1-205ENST00000434813 ASH1LQ9NR48 2969 aaKnown RBP14.37□□□□□ -0.11
CLK1-205ENST00000434813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 SLC50A1Q9BRV3 221 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 AP5S1Q9NUS5 200 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 MOB4Q9Y3A3 225 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 CSMD1Q96PZ7 3565 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 OR4C46A6NHA9 309 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 CSN3P07498 182 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 IGLL1P15814 213 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 ZNF80P51504 273 aaPredicted RBP14.36□□□□□ -0.11
CLK1-205ENST00000434813 HSPB8Q9UJY1 196 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 U3KQK5 164 aa14.36□□□□□ -0.11
CLK1-205ENST00000434813 TMEM213A2RRL7 107 aa14.35□□□□□ -0.11
CLK1-205ENST00000434813 RBAKDNA6NC62 111 aa14.35□□□□□ -0.11
CLK1-205ENST00000434813 C19orf54Q5BKX5 351 aa14.35□□□□□ -0.11
CLK1-205ENST00000434813 FAM104BQ5XKR9 115 aa14.35□□□□□ -0.11
CLK1-205ENST00000434813 PIMREGQ9BSJ6 248 aa14.35□□□□□ -0.11
CLK1-205ENST00000434813 IGLC6P0CF74 106 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 CRIP2P52943 208 aaPredicted RBP14.34□□□□□ -0.11
CLK1-205ENST00000434813 AKAP6Q13023 2319 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 BATFQ16520 125 aa14.34□□□□□ -0.11
CLK1-205ENST00000434813 PET117Q6UWS5 81 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms