RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	SNRPGP15	A8MWD9	76 aa		5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	SMIM18	P0DKX4	95 aa		5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	UCP3	P55916	312 aa		5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	ETFRF1	Q6IPR1	90 aa		5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	ZNF431	Q8TF32	576 aa	Predicted RBP	5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	ZNF479	Q96JC4	524 aa		5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	SCN3B	Q9NY72	215 aa		5.56	□□□□□ -1.52
NIF3L1-206	ENST00000416651	GAGE12H	A6NDE8	117 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	RBFOX3	A6NFN3	312 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	SRI	P30626	198 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	TGFBR1	P36897	503 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	TAS2R46	P59540	309 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	RND3	P61587	244 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	CD300C	Q08708	224 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	RGS21	Q2M5E4	152 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651		Q6ZRU5	148 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	SELENOH	Q8IZQ5	122 aa	Known RBP	5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	C10orf126	Q8N4M7	172 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	OR1B1	Q8NGR6	318 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	RNASE11	Q8TAA1	199 aa	Known RBP	5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	TRGV9	Q99603	122 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	MRPL32	Q9BYC8	188 aa	Known RBP	5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	DIABLO	Q9NR28	239 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651	BLOC1S6	Q9UL45	172 aa		5.55	□□□□□ -1.52
NIF3L1-206	ENST00000416651		H3BRN7	92 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	SLC17A3	O00476	420 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	MRPS12	O15235	138 aa	Known RBP	5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	NDUFA5	Q16718	116 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	LINC01556	Q5JQF7	62 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	PRSS48	Q7RTY5	328 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	S100Z	Q8WXG8	99 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	C20orf144	Q9BQM9	153 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651	RBKS	Q9H477	322 aa		5.54	□□□□□ -1.52
NIF3L1-206	ENST00000416651		A0A0A6YYH2	397 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651		A6NJ64	397 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	DIRC3	C9JPN6	131 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651		K7EP13	123 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	S100A1	P23297	94 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	S100G	P29377	79 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	TCL1A	P56279	114 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	ERCC8	Q13216	396 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	BTN1A1	Q13410	526 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	ZNF846	Q147U1	533 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	PRR9	Q5T870	116 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	SAMD13	Q5VXD3	122 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	LPCAT3	Q6P1A2	487 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	LHFPL1	Q86WI0	220 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	LGI3	Q8N145	548 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	OR4D10	Q8NGI6	311 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	OR4D5	Q8NGN0	318 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	GPX8	Q8TED1	209 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	GLYATL2	Q8WU03	294 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	SLC35E1	Q96K37	410 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	RBM38	Q9H0Z9	239 aa	Known RBP	5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	TPRKB	Q9Y3C4	175 aa		5.53	□□□□□ -1.52
NIF3L1-206	ENST00000416651	TRAV5	A0A0B4J249	113 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	TRGV4	A0A0C4DH28	118 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	CDS2	O95674	445 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	PTTG1IP	P53801	180 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	PATE2	Q6UY27	113 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651		Q6ZNX1	250 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	ARL6IP6	Q8N6S5	226 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	LINC00477	Q96M19	166 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	VGLL1	Q99990	258 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	PYGO2	Q9BRQ0	406 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	SHANK2-AS3	Q9BTD1	123 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	COX11	Q9Y6N1	276 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	TMEM56-RWDD3	S4R434	201 aa		5.52	□□□□□ -1.53
NIF3L1-206	ENST00000416651	IGHV3-16	A0A0C4DH30	117 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	RNF222	A6NCQ9	220 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	PMS2P5	A8MQ11	134 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	PRSS3	P35030	304 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	RCVRN	P35243	200 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	GPX4	P36969	197 aa	Predicted RBP	5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	BCAP31	P51572	246 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	TMBIM6	P55061	237 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	KRTAP10-8	P60410	259 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	DAZ4	Q86SG3	579 aa	Known RBP	5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	FAM219A	Q8IW50	185 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	OR13C8	Q8NGS7	320 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	DTD1	Q8TEA8	209 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	RAB2B	Q8WUD1	216 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	RBPMS	Q93062	196 aa	Known RBP	5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	TMEM222	Q9H0R3	208 aa		5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651	DAZ3	Q9NR90	486 aa	Known RBP	5.51	□□□□□ -1.53
NIF3L1-206	ENST00000416651		A0A087X0K7	114 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	PRSS46	E5RG02	174 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	GABARAP	H6UMI1	98 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	GABARAP	O95166	117 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	IAPP	P10997	89 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	TNFSF8	P32971	234 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	VAMP2	P63027	116 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	GPR107	Q5VW38	600 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	MORN5	Q5VZ52	161 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	TMEM268	Q5VZI3	342 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	SNX29P2	Q8IUI4	249 aa		5.5	□□□□□ -1.53
NIF3L1-206	ENST00000416651	EIF4E3	Q8N5X7	224 aa	Known RBP	5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms