RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 LOC389332A0A1B0GUA5 103 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 TMEM213A2RRL7 107 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 OR2T8A6NH00 312 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
MSH5-201ENST00000375703 RPL7P18124 248 aaKnown RBP11.37□□□□□ -0.59
MSH5-201ENST00000375703 CCDC144NLQ6NUI1 221 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 DYNAPQ8N1N2 210 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 SVIPQ8NHG7 77 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 D6R8Y8 96 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 FAM106CPP0CH98 169 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 CDSNQ15517 529 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 FAM106AQ4KMX7 169 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 VMO1Q7Z5L0 202 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 PRR25Q96S07 402 aa11.37□□□□□ -0.59
MSH5-201ENST00000375703 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 MUC21Q5SSG8 566 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 PRELID3AQ96N28 172 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 CTSGP08311 255 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 SIGLEC8Q9NYZ4 499 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 RABAC1Q9UI14 185 aa11.36□□□□□ -0.59
MSH5-201ENST00000375703 SPTBN2O15020 2390 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 BVES-AS1Q5T3Y7 98 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 IGFL4Q6B9Z1 124 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 C12orf54Q6X4T0 127 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 U3KQK5 164 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 LRBAP50851 2863 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 SCGB2A1O75556 95 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 NCR2O95944 276 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 EGR2P11161 476 aaPredicted RBP11.35□□□□□ -0.59
MSH5-201ENST00000375703 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
MSH5-201ENST00000375703 C1orf122Q6ZSJ8 110 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 COX8CQ7Z4L0 72 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 SMAD5-AS1Q9Y6J3 95 aa11.35□□□□□ -0.59
MSH5-201ENST00000375703 Q8N6K4 173 aa11.34□□□□□ -0.59
MSH5-201ENST00000375703 BMI1P35226 326 aa11.34□□□□□ -0.59
MSH5-201ENST00000375703 MRPL51Q4U2R6 128 aaKnown RBP11.34□□□□□ -0.59
MSH5-201ENST00000375703 C11orf71Q6IPW1 123 aa11.34□□□□□ -0.59
MSH5-201ENST00000375703 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
MSH5-201ENST00000375703 VGLL1Q99990 258 aa11.34□□□□□ -0.59
MSH5-201ENST00000375703 IGHV3OR16-8A0A075B7F1 116 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 A0A096LNJ9 63 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
MSH5-201ENST00000375703 OOSP1A8MZH6 123 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 EBI3Q14213 229 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 TWIST1Q15672 202 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 Q8TAT8 98 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 ABCA4P78363 2273 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 IGHV3-35A0A0C4DH35 117 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 CBY3A6NI87 242 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 HLA-DMBP28068 263 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
MSH5-201ENST00000375703 VAMP3Q15836 100 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 MINOS1Q5TGZ0 78 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 MINOS1-NBL1R4GNA1 71 aa11.33□□□□□ -0.6
MSH5-201ENST00000375703 PTPRZ1P23471 2315 aaPredicted RBP11.32□□□□□ -0.6
MSH5-201ENST00000375703 A0A087X0K7 114 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 COX8AP10176 69 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 RPS20P60866 119 aaKnown RBP11.32□□□□□ -0.6
MSH5-201ENST00000375703 HIST1H1AQ02539 215 aaPredicted RBP11.32□□□□□ -0.6
MSH5-201ENST00000375703 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 IGHV2-70DA0A0C4DH43 119 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 TAX1BP3O14907 124 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 IGHG4P01861 327 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 CKS2P33552 79 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 DCHS2Q6V1P9 2916 aa11.32□□□□□ -0.6
MSH5-201ENST00000375703 ZFP36P26651 326 aaKnown RBP11.31□□□□□ -0.6
MSH5-201ENST00000375703 GPR183P32249 361 aa11.31□□□□□ -0.6
MSH5-201ENST00000375703 ERASQ7Z444 233 aa11.31□□□□□ -0.6
MSH5-201ENST00000375703 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
MSH5-201ENST00000375703 MSRB2Q9Y3D2 182 aa11.31□□□□□ -0.6
MSH5-201ENST00000375703 SNAI2O43623 268 aa11.31□□□□□ -0.6
MSH5-201ENST00000375703 CDKN1BP46527 198 aa11.31□□□□□ -0.6
MSH5-201ENST00000375703 FXYD7P58549 80 aa11.31□□□□□ -0.6
MSH5-201ENST00000375703 ORM1P02763 201 aa11.3□□□□□ -0.6
MSH5-201ENST00000375703 Q8N9W7 124 aa11.3□□□□□ -0.6
MSH5-201ENST00000375703 OR4C5Q8NGB2 326 aa11.3□□□□□ -0.6
MSH5-201ENST00000375703 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
MSH5-201ENST00000375703 TLN1Q9Y490 2541 aaKnown RBP11.3□□□□□ -0.6
MSH5-201ENST00000375703 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
MSH5-201ENST00000375703 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
MSH5-201ENST00000375703 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 NHLH1Q02575 133 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 FABP5P3A8MUU1 101 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 HBDP02042 147 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 RHOGP84095 191 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 C15orf32Q32M92 178 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 ZNF575Q86XF7 245 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 RELNP78509 3460 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 NPYP01303 97 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 CLEC3BP05452 202 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 ERCC8Q13216 396 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 LGALS9BQ3B8N2 356 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
MSH5-201ENST00000375703 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms