RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CNOT1A5YKK6 2376 aaKnown RBP10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 PI4KAP42356 2102 aa10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 TRAV25A0A0B4J276 109 aa10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 EGR2P11161 476 aaPredicted RBP10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 HOXD3P31249 432 aaPredicted RBP10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 CMC4P56277 68 aaPredicted RBP10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 MPLKIPQ8TAP9 179 aa10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 A0A1B0GX51 115 aa10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 HAMPP81172 84 aa10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 C20orf144Q9BQM9 153 aa10.82□□□□□ -0.68
RAPGEF1-201ENST00000372189 CD7P09564 240 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 Q6P435 159 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 ETV2O00321 342 aaPredicted RBP10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 ACYP1P07311 99 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 GLMPQ8WWB7 406 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 SLX1AQ9BQ83 275 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 TOMM7Q9P0U1 55 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 RFNGQ9Y644 331 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 IGF2-ASQ6U949 168 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 C3orf56Q8N813 242 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 CRLF1O75462 422 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 C15orf32Q32M92 178 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 FAM231DQ6ZW35 169 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 SHISA9B4DS77 424 aa10.81□□□□□ -0.68
RAPGEF1-201ENST00000372189 TRBV6-6A0A0A6YYG2 114 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 ANAPC1Q9H1A4 1944 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 H0YJW9 148 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 SAA4P35542 130 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 NUP35Q8NFH5 326 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 SYS1-DBNDD2H3BUS1 97 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 C5orf64Q2M2E5 130 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 PPIFP30405 207 aaKnown RBP10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 MST1LQ2TV78 715 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
RAPGEF1-201ENST00000372189 RNF114Q9Y508 228 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 NCOR1O75376 2440 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 HEATR5BQ9P2D3 2071 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 FAM236AA0A1B0GUQ0 79 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 FAM236BA0A1B0GV22 79 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 A0A1W2PPM0 123 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 PLXNA2O75051 1894 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 TCRAP04437 139 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 Q6ZS49 121 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 FAM215AQ9Y5M1 114 aa10.79□□□□□ -0.68
RAPGEF1-201ENST00000372189 FANCMQ8IYD8 2048 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 OVOL1O14753 267 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 CD28P10747 220 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 TRGV9Q99603 122 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 TRBV7-1A0A0A6YYK4 115 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 C10orf55Q5SWW7 151 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 RNF183Q96D59 192 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 KLHL30-AS1Q8NEE0 82 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 RNASE8Q8TDE3 154 aaKnown RBP10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 RUSC1-AS1Q66K80 236 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 CLUHP3Q96NS8 147 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 CFPP27918 469 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 SPSB3Q6PJ21 355 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 Q8TCH9 128 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 ANAPC10Q9UM13 185 aa10.78□□□□□ -0.68
RAPGEF1-201ENST00000372189 USMG5Q96IX5 58 aa10.77□□□□□ -0.68
RAPGEF1-201ENST00000372189 SMIM9A6NGZ8 99 aa10.77□□□□□ -0.69
RAPGEF1-201ENST00000372189 ATP5G1P05496 136 aa10.77□□□□□ -0.69
RAPGEF1-201ENST00000372189 LYZL1Q6UWQ5 148 aa10.77□□□□□ -0.69
RAPGEF1-201ENST00000372189 G3V4G9 280 aa10.77□□□□□ -0.69
RAPGEF1-201ENST00000372189 Q0VG73 95 aa10.77□□□□□ -0.69
RAPGEF1-201ENST00000372189 TRGV11A0A075B6L2 103 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 LCNL1Q6ZST4 164 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGKV3D-20A0A0C4DH25 116 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 WT1P19544 449 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 POLR3KQ9Y2Y1 108 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGKV2-40A0A087WW87 121 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 H3BMG7 143 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGKV2D-40P01614 121 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 NTF4P34130 210 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 PMS2P5A8MQ11 134 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 F8WEM9 126 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 PRB2P02812 416 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 ZNF138P52744 262 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
RAPGEF1-201ENST00000372189 MDC1Q14676 2089 aaKnown RBP10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 ZNF329Q86UD4 541 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 SCRT1Q9BWW7 348 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGHV1-69DA0A0B4J2H0 117 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGHV2-70DA0A0C4DH43 119 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 IGHV1-69P01742 117 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 GATA4P43694 442 aa10.75□□□□□ -0.69
RAPGEF1-201ENST00000372189 J3QLI3 93 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms