RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 EXOC3-AS1Q8N2X6 119 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
PDLIM7-202ENST00000355841 NBEAL2Q6ZNJ1 2754 aa13.17□□□□□ -0.3
PDLIM7-202ENST00000355841 IGKV3-20P01619 116 aa13.17□□□□□ -0.3
PDLIM7-202ENST00000355841 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
PDLIM7-202ENST00000355841 STAG3L3P0CL85 134 aa13.17□□□□□ -0.3
PDLIM7-202ENST00000355841 PSG3Q16557 428 aa13.17□□□□□ -0.3
PDLIM7-202ENST00000355841 UQCC3Q6UW78 93 aa13.16□□□□□ -0.3
PDLIM7-202ENST00000355841 PQLC2Q6ZP29 291 aa13.16□□□□□ -0.3
PDLIM7-202ENST00000355841 SAV1Q9H4B6 383 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-202ENST00000355841 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
PDLIM7-202ENST00000355841 H3BMM0 161 aa13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 M0R3E3 92 aa13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 FGF8P55075 233 aaPredicted RBP13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 IQCF2Q8IXL9 164 aa13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 TGP01266 2768 aa13.15□□□□□ -0.3
PDLIM7-202ENST00000355841 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 PRAC2D3DTV9 90 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 HLA-DRB4P13762 266 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 PDE6HQ13956 83 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 ICAM4Q14773 271 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 RPUSD4Q96CM3 377 aaKnown RBP13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 HLA-DRB4X5D2U9 266 aa13.15□□□□□ -0.31
PDLIM7-202ENST00000355841 A0A0J9YX75 114 aa13.14□□□□□ -0.31
PDLIM7-202ENST00000355841 ZNF253O75346 499 aa13.14□□□□□ -0.31
PDLIM7-202ENST00000355841 GCHFRP30047 84 aa13.14□□□□□ -0.31
PDLIM7-202ENST00000355841 TMPRSS5Q9H3S3 457 aa13.14□□□□□ -0.31
PDLIM7-202ENST00000355841 RETNQ9HD89 108 aa13.14□□□□□ -0.31
PDLIM7-202ENST00000355841 RAB19A4D1S5 217 aa13.13□□□□□ -0.31
PDLIM7-202ENST00000355841 UMAD1C9J7I0 102 aa13.13□□□□□ -0.31
PDLIM7-202ENST00000355841 TEX46H3BTG2 121 aa13.13□□□□□ -0.31
PDLIM7-202ENST00000355841 CXorf1O96002 111 aa13.13□□□□□ -0.31
PDLIM7-202ENST00000355841 PSG9Q00887 426 aa13.13□□□□□ -0.31
PDLIM7-202ENST00000355841 A0A1B0GV50 99 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 MAP1LC3B2A6NCE7 125 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 HIST1H1AQ02539 215 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 MAP1LC3BQ9GZQ8 125 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 Q9H3A6 140 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 APOC4P55056 127 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 FXYD7P58549 80 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
PDLIM7-202ENST00000355841 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-202ENST00000355841 GIG44P09565 113 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-202ENST00000355841 SMUG1Q53HV7 270 aa13.11□□□□□ -0.31
PDLIM7-202ENST00000355841 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
PDLIM7-202ENST00000355841 SFT2D1Q8WV19 159 aa13.11□□□□□ -0.31
PDLIM7-202ENST00000355841 KIR2DL5BA0A0G2JN68 375 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 KIR2DL5BA0A0G2JPC4 375 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 BTN1A1Q13410 526 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 KIR2DL5AQ8N109 375 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 KIR2DL5BQ8NHK3 375 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 TM2D3Q9BRN9 247 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 SLC35B3Q9H1N7 401 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
PDLIM7-202ENST00000355841 PGPA6NDG6 321 aa13.08□□□□□ -0.31
PDLIM7-202ENST00000355841 UBE2G2P60604 165 aa13.08□□□□□ -0.31
PDLIM7-202ENST00000355841 ERCC8Q13216 396 aa13.08□□□□□ -0.31
PDLIM7-202ENST00000355841 TMEM167BQ9NRX6 74 aa13.08□□□□□ -0.31
PDLIM7-202ENST00000355841 XCL2Q9UBD3 114 aa13.08□□□□□ -0.31
PDLIM7-202ENST00000355841 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.31
PDLIM7-202ENST00000355841 TENM3Q9P273 2699 aa13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 SULT1A2P50226 295 aa13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 DPPA3Q6W0C5 159 aa13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 OR10J6PQ8NGY7 276 aa13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 RPH3ALQ9UNE2 315 aa13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
PDLIM7-202ENST00000355841 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-202ENST00000355841 APOC3P02656 99 aa13.07□□□□□ -0.32
PDLIM7-202ENST00000355841 H2AFB1P0C5Y9 115 aa13.07□□□□□ -0.32
PDLIM7-202ENST00000355841 AMTNQ6UX39 209 aa13.07□□□□□ -0.32
PDLIM7-202ENST00000355841 MBD3L1Q8WWY6 194 aa13.07□□□□□ -0.32
PDLIM7-202ENST00000355841 OTORQ9NRC9 128 aa13.07□□□□□ -0.32
PDLIM7-202ENST00000355841 YTHDF2Q9Y5A9 579 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-202ENST00000355841 M0R2Z0 102 aa13.06□□□□□ -0.32
PDLIM7-202ENST00000355841 NHLRC4P0CG21 123 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-202ENST00000355841 RAB5CP51148 216 aa13.06□□□□□ -0.32
PDLIM7-202ENST00000355841 GNG5P63218 68 aa13.06□□□□□ -0.32
PDLIM7-202ENST00000355841 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-202ENST00000355841 SPATA25Q9BR10 227 aa13.06□□□□□ -0.32
PDLIM7-202ENST00000355841 ZMAT4Q9H898 229 aa13.06□□□□□ -0.32
PDLIM7-202ENST00000355841 A8MTW9 85 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 UBE2CO00762 179 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms