RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
LRRC28-202ENST00000331450 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
LRRC28-202ENST00000331450 PRELID1Q9Y255 219 aa11.8□□□□□ -0.52
LRRC28-202ENST00000331450 KIR2DL5BA0A0G2JN68 375 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 KIR2DL5BA0A0G2JPC4 375 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-202ENST00000331450 RPL35AP18077 110 aaKnown RBP11.79□□□□□ -0.52
LRRC28-202ENST00000331450 FGF8P55075 233 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-202ENST00000331450 ICAM4Q14773 271 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 HAGHQ16775 308 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 KIR2DL5AQ8N109 375 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 KIR2DL5BQ8NHK3 375 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 Q9H3A6 140 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 TMEM167BQ9NRX6 74 aa11.79□□□□□ -0.52
LRRC28-202ENST00000331450 PRAC2D3DTV9 90 aa11.78□□□□□ -0.52
LRRC28-202ENST00000331450 APOC4P55056 127 aa11.78□□□□□ -0.52
LRRC28-202ENST00000331450 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
LRRC28-202ENST00000331450 FAM74A1Q5RGS3 127 aa11.78□□□□□ -0.52
LRRC28-202ENST00000331450 EBLN2Q6P2I7 272 aa11.78□□□□□ -0.52
LRRC28-202ENST00000331450 OR8A1Q8NGG7 326 aa11.78□□□□□ -0.52
LRRC28-202ENST00000331450 TMPRSS5Q9H3S3 457 aa11.78□□□□□ -0.52
LRRC28-202ENST00000331450 ZNF705DP0CH99 300 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-202ENST00000331450 ZNF705BP0CI00 300 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-202ENST00000331450 PRB4P10163 310 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-202ENST00000331450 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
LRRC28-202ENST00000331450 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
LRRC28-202ENST00000331450 ALKAL2Q6UX46 152 aa11.77□□□□□ -0.53
LRRC28-202ENST00000331450 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.53
LRRC28-202ENST00000331450 OTORQ9NRC9 128 aa11.77□□□□□ -0.53
LRRC28-202ENST00000331450 DUSP14O95147 198 aaKnown RBP11.76□□□□□ -0.53
LRRC28-202ENST00000331450 GIG44P09565 113 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-202ENST00000331450 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
LRRC28-202ENST00000331450 MORN3Q6PF18 240 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-202ENST00000331450 SFT2D1Q8WV19 159 aa11.76□□□□□ -0.53
LRRC28-202ENST00000331450 ASCL2Q99929 193 aa11.76□□□□□ -0.53
LRRC28-202ENST00000331450 PRKDCP78527 4128 aaKnown RBP11.75□□□□□ -0.53
LRRC28-202ENST00000331450 TRAV1-1A0A0B4J248 108 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 GGTLC3B5MD39 225 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 UBE2CO00762 179 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-202ENST00000331450 IQCF2Q8IXL9 164 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 ARL6IP6Q8N6S5 226 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 OR4B1Q8NGF8 309 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 CSTL1Q9H114 145 aa11.75□□□□□ -0.53
LRRC28-202ENST00000331450 COL7A1Q02388 2944 aa11.74□□□□□ -0.53
LRRC28-202ENST00000331450 A0A1W2PRE2 83 aa11.74□□□□□ -0.53
LRRC28-202ENST00000331450 PGPA6NDG6 321 aa11.74□□□□□ -0.53
LRRC28-202ENST00000331450 IGKV3-20P01619 116 aa11.74□□□□□ -0.53
LRRC28-202ENST00000331450 YTHDF2Q9Y5A9 579 aaKnown RBP11.74□□□□□ -0.53
LRRC28-202ENST00000331450 ARL2-SNX15V9GYD0 113 aa11.74□□□□□ -0.53
LRRC28-202ENST00000331450 FAM74A7A6NL05 159 aa11.73□□□□□ -0.53
LRRC28-202ENST00000331450 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-202ENST00000331450 Q6ZWC4 215 aa11.73□□□□□ -0.53
LRRC28-202ENST00000331450 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
LRRC28-202ENST00000331450 RXFP4Q8TDU9 374 aa11.73□□□□□ -0.53
LRRC28-202ENST00000331450 SLC35B3Q9H1N7 401 aa11.73□□□□□ -0.53
LRRC28-202ENST00000331450 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-202ENST00000331450 RBAKDNA6NC62 111 aa11.72□□□□□ -0.53
LRRC28-202ENST00000331450 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
LRRC28-202ENST00000331450 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-202ENST00000331450 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-202ENST00000331450 NUTF2P61970 127 aaKnown RBP11.72□□□□□ -0.53
LRRC28-202ENST00000331450 C9orf47Q6ZRZ4 202 aa11.72□□□□□ -0.53
LRRC28-202ENST00000331450 C5orf17Q8NAS9 161 aa11.72□□□□□ -0.53
LRRC28-202ENST00000331450 SPATA25Q9BR10 227 aa11.72□□□□□ -0.53
LRRC28-202ENST00000331450 A0A1B0GV50 99 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 ZNF705EA8MWA4 302 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-202ENST00000331450 HBE1P02100 147 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.53
LRRC28-202ENST00000331450 CSN1S1P47710 185 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 UBE2G2P60604 165 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
LRRC28-202ENST00000331450 CCL20P78556 96 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 DEFB135Q30KP9 77 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 TEX261Q6UWH6 196 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 CSNK1G2-AS1Q8NCQ2 148 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 ODF3Q96PU9 254 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 C1QTNF4Q9BXJ3 329 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 RETNQ9HD89 108 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 TP53TG1Q9Y2A0 90 aa11.71□□□□□ -0.53
LRRC28-202ENST00000331450 CT45A10P0DMU9 189 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 GNG5P63218 68 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 ERCC8Q13216 396 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 CCDC28AQ8IWP9 274 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 RNF183Q96D59 192 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 FAM19A4Q96LR4 140 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 VGLL1Q99990 258 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 OVOL2Q9BRP0 275 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 NKX6-2Q9C056 277 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-202ENST00000331450 AGPAT4-IT1Q9H0P7 198 aa11.7□□□□□ -0.54
LRRC28-202ENST00000331450 TEX46H3BTG2 121 aa11.69□□□□□ -0.54
LRRC28-202ENST00000331450 M0R2Z0 102 aa11.69□□□□□ -0.54
LRRC28-202ENST00000331450 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
LRRC28-202ENST00000331450 AMBPP02760 352 aa11.69□□□□□ -0.54
LRRC28-202ENST00000331450 TCRAP04437 139 aa11.69□□□□□ -0.54
LRRC28-202ENST00000331450 PPT1P50897 306 aa11.69□□□□□ -0.54
LRRC28-202ENST00000331450 FXYD7P58549 80 aa11.69□□□□□ -0.54
LRRC28-202ENST00000331450 SPINK13Q1W4C9 94 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms