RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ZNF236Q9UL36 1845 aa12.03□□□□□ -0.48
SCN3B-201ENST00000299333 EFNA2O43921 213 aa12.03□□□□□ -0.48
SCN3B-201ENST00000299333 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
SCN3B-201ENST00000299333 MRPL51Q4U2R6 128 aaKnown RBP12.03□□□□□ -0.48
SCN3B-201ENST00000299333 DTX1Q86Y01 620 aa12.03□□□□□ -0.48
SCN3B-201ENST00000299333 MESP1Q9BRJ9 268 aa12.03□□□□□ -0.48
SCN3B-201ENST00000299333 MRPL35Q9NZE8 188 aaKnown RBP12.03□□□□□ -0.48
SCN3B-201ENST00000299333 THBDP07204 575 aa12.02□□□□□ -0.48
SCN3B-201ENST00000299333 YPEL3P61236 119 aaPredicted RBP12.02□□□□□ -0.48
SCN3B-201ENST00000299333 IGLV3-32A0A0A0MS00 114 aa12.02□□□□□ -0.48
SCN3B-201ENST00000299333 CRLF1O75462 422 aa12.02□□□□□ -0.48
SCN3B-201ENST00000299333 RPL35AP18077 110 aaKnown RBP12.02□□□□□ -0.48
SCN3B-201ENST00000299333 MRPL14Q6P1L8 145 aaKnown RBP12.02□□□□□ -0.48
SCN3B-201ENST00000299333 SLX1AQ9BQ83 275 aa12.02□□□□□ -0.48
SCN3B-201ENST00000299333 V9GYV3 84 aa12.02□□□□□ -0.48
SCN3B-201ENST00000299333 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.49
SCN3B-201ENST00000299333 VMO1Q7Z5L0 202 aa12.02□□□□□ -0.49
SCN3B-201ENST00000299333 PINLYPA6NC86 204 aa12.02□□□□□ -0.49
SCN3B-201ENST00000299333 DKK1O94907 266 aa12.02□□□□□ -0.49
SCN3B-201ENST00000299333 TMEM75Q8N9X5 138 aa12.02□□□□□ -0.49
SCN3B-201ENST00000299333 IL17RELQ6ZVW7 336 aa12.02□□□□□ -0.49
SCN3B-201ENST00000299333 HLA-DRB4P13762 266 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 RNF183Q96D59 192 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 SHANK2-AS3Q9BTD1 123 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 HLA-DRB4X5D2U9 266 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 TRBV7-1A0A0A6YYK4 115 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
SCN3B-201ENST00000299333 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
SCN3B-201ENST00000299333 C12orf74Q32Q52 190 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 C10orf91Q5T1B1 145 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 IGLC7A0M8Q6 106 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
SCN3B-201ENST00000299333 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 C20orf204Q6ZNR8 217 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 DSCR8Q96T75 97 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 SPRR3Q9UBC9 169 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 Q6P435 159 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 MPLKIPQ8TAP9 179 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 SIGLEC8Q9NYZ4 499 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 NDUFA12Q9UI09 145 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 C22orf46C9J442 243 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 TRBV6-6A0A0A6YYG2 114 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 SMIM27A0A1W2PRY6 76 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 C5orf64Q2M2E5 130 aa12□□□□□ -0.49
SCN3B-201ENST00000299333 NXPH4O95158 308 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 HLA-DMBP28068 263 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 RNASE6Q93091 150 aaKnown RBP11.99□□□□□ -0.49
SCN3B-201ENST00000299333 AKAP6Q13023 2319 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 SHISA9B4DS77 424 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 IGKV1-16P04430 117 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 TAL2Q16559 108 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 MSRB2Q9Y3D2 182 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 RHPN1-AS1Q9BWJ2 59 aa11.99□□□□□ -0.49
SCN3B-201ENST00000299333 SCRT2Q9NQ03 307 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 DKK2Q9UBU2 259 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 CHKB-CPT1BH3BT56 60 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 RNF5Q99942 180 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 RALGAPA2Q2PPJ7 1873 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 DOCK9Q9BZ29 2069 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 IGLV3-12A0A075B6K2 115 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 I3L3M4 83 aa11.98□□□□□ -0.49
SCN3B-201ENST00000299333 IGHV3-16A0A0C4DH30 117 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 IGKV3D-7A0A0C4DH55 119 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 PDE6HQ13956 83 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 KIF26BQ2KJY2 2108 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 FLVCR1-AS1Q8TAF5 88 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 EFNA4P52798 201 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 F6UB75 175 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 C1orf195Q5TG92 126 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 CEP290O15078 2479 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 BUB1B-PAK6H3BSN5 160 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 NPYP01303 97 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 ACYP1P07311 99 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 MUSTN1Q8IVN3 82 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
SCN3B-201ENST00000299333 SDHAF1A6NFY7 115 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 SIVA1O15304 175 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 ZNF672Q499Z4 452 aaPredicted RBP11.96□□□□□ -0.49
SCN3B-201ENST00000299333 PSMB8P28062 276 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 FAM240AA0A1B0GVK7 77 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 GGNQ86UU5 652 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 SPACA3Q8IXA5 215 aa11.96□□□□□ -0.49
SCN3B-201ENST00000299333 GAFA1Q96PS6 74 aa11.96□□□□□ -0.5
SCN3B-201ENST00000299333 AHCTF1Q8WYP5 2266 aa11.96□□□□□ -0.5
SCN3B-201ENST00000299333 F8VRH5 84 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 TMEM178BH3BS89 294 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 Q6ZS49 121 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 DEFB125Q8N687 156 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 PSCAO43653 123 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 J3QQQ9 107 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 PAX9P55771 341 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 KLF5Q13887 457 aaPredicted RBP11.95□□□□□ -0.5
SCN3B-201ENST00000299333 UNQ6494/PRO21346Q6UXR6 183 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 853.7 ms