RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 LCNL1Q6ZST4 164 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 FAM231DQ6ZW35 169 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 OTORQ9NRC9 128 aa10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 CHTOPQ9Y3Y2 248 aaKnown RBP10.57□□□□□ -0.72
TNFRSF21-201ENST00000296861 CENPEQ02224 2701 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 E7EQL1 145 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 GRNP28799 593 aaKnown RBP10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 CR1LQ2VPA4 569 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 ATP5L2Q7Z4Y8 100 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 FAM57AQ8TBR7 257 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 NCOR1P1Q9H4R4 102 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 MSRB1Q9NZV6 116 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 TMEM238C9JI98 176 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 FNDC10F2Z333 226 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 SAP30O75446 220 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 IGLV2-23P01705 113 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 OR4A5Q8NH83 315 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 PSMB11A5LHX3 300 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 K7EP13 123 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 FCN3O75636 299 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 IGLC1P0CG04 106 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 GP9P14770 177 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 ATP5IP56385 69 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 KLF5Q13887 457 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
TNFRSF21-201ENST00000296861 ERCC8Q13216 396 aa10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 TRGV9Q99603 122 aa10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 FAM231BA6NCW3 169 aa10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 ARL3P36405 182 aa10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 GTF2H5Q6ZYL4 71 aa10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 TMEM97Q5BJF2 176 aa10.55□□□□□ -0.72
TNFRSF21-201ENST00000296861 IGKV1-17P01599 117 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 PCP2Q8IVA1 136 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 RNF182Q8N6D2 247 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 POLQO75417 2590 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 BUB1B-PAK6H3BSN5 160 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 LTAP01374 205 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 TMEM155Q4W5P6 130 aa10.54□□□□□ -0.72
TNFRSF21-201ENST00000296861 DCHS2Q6V1P9 2916 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 USP9XQ93008 2570 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 SONP18583 2426 aaKnown RBP10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 NACAE9PAV3 2078 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 A1L4Q6 167 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 CLEC3BP05452 202 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 ORMDL3Q8N138 153 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 A6NDN8 102 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 CD5LO43866 347 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 SH2D1AO60880 128 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 TEX36Q5VZQ5 186 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 DKK2Q9UBU2 259 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 RABAC1Q9UI14 185 aa10.53□□□□□ -0.72
TNFRSF21-201ENST00000296861 THBDP07204 575 aa10.52□□□□□ -0.72
TNFRSF21-201ENST00000296861 RHOGP84095 191 aa10.52□□□□□ -0.72
TNFRSF21-201ENST00000296861 ASCL5Q7RTU5 278 aa10.52□□□□□ -0.72
TNFRSF21-201ENST00000296861 NEU4Q8WWR8 484 aaPredicted RBP10.52□□□□□ -0.72
TNFRSF21-201ENST00000296861 FOXC2Q99958 501 aa10.52□□□□□ -0.72
TNFRSF21-201ENST00000296861 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.72
TNFRSF21-201ENST00000296861 SIGLEC8Q9NYZ4 499 aa10.52□□□□□ -0.72
TNFRSF21-201ENST00000296861 Q6ZS92 163 aa10.52□□□□□ -0.73
TNFRSF21-201ENST00000296861 THAP8Q8NA92 274 aa10.52□□□□□ -0.73
TNFRSF21-201ENST00000296861 WFDC12Q8WWY7 111 aa10.52□□□□□ -0.73
TNFRSF21-201ENST00000296861 TRBV19A0A075B6N1 114 aa10.52□□□□□ -0.73
TNFRSF21-201ENST00000296861 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
TNFRSF21-201ENST00000296861 VGLL1Q99990 258 aa10.52□□□□□ -0.73
TNFRSF21-201ENST00000296861 LEPP41159 167 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 IFI27L1Q96BM0 104 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 C21orf62Q9NYP8 219 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 BSNQ9UPA5 3926 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 TRAV26-2A0A0B4J265 109 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 K7ERJ3 54 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 NPYP01303 97 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 MFAP4P55083 255 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 NDPQ00604 133 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 ZNF747Q9BV97 191 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 CCL21O00585 134 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 PSG3Q16557 428 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 C1RLQ9NZP8 487 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 HIVEP3Q5T1R4 2406 aa10.51□□□□□ -0.73
TNFRSF21-201ENST00000296861 KIR3DS1Q14943 382 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 TIMD4Q96H15 378 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 MLST8Q9BVC4 326 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 RAI1Q7Z5J4 1906 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 GLMPQ8WWB7 406 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 DPM3Q9P2X0 92 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 SPCS1Q9Y6A9 102 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 NBR2O15453 112 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 PLP1P60201 277 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 MS4A6AQ9H2W1 248 aa10.5□□□□□ -0.73
TNFRSF21-201ENST00000296861 SCRT2Q9NQ03 307 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms