RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ZNF815PA8K554 130 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 C1orf122Q6ZSJ8 110 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 OR9G4Q8NGQ1 327 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
USP43-201ENST00000285199 E7EUB6 86 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 TTC32Q5I0X7 151 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 RNASE6Q93091 150 aaKnown RBP12.61□□□□□ -0.39
USP43-201ENST00000285199 A0A0U1RRA0 63 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 NBR2O15453 112 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 RHOGP84095 191 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 ZNF56Q15929 161 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 CHAC1Q9BUX1 264 aa12.61□□□□□ -0.39
USP43-201ENST00000285199 FAM106CPP0CH98 169 aa12.6□□□□□ -0.39
USP43-201ENST00000285199 FAM120AOSQ5T036 256 aa12.6□□□□□ -0.39
USP43-201ENST00000285199 TRGV9Q99603 122 aa12.6□□□□□ -0.39
USP43-201ENST00000285199 VCANP13611 3396 aa12.6□□□□□ -0.39
USP43-201ENST00000285199 IGHV1-3A0A0C4DH29 117 aa12.6□□□□□ -0.39
USP43-201ENST00000285199 SIGLEC8Q9NYZ4 499 aa12.6□□□□□ -0.39
USP43-201ENST00000285199 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
USP43-201ENST00000285199 TRAV8-2A0A0B4J237 113 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 H3BMG7 143 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 COX8AP10176 69 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 PRTN3P24158 256 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 CD59P13987 128 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 RNASE4P34096 147 aaKnown RBP12.59□□□□□ -0.39
USP43-201ENST00000285199 CDKN1BP46527 198 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 RNF182Q8N6D2 247 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 HOXA3O43365 443 aaPredicted RBP12.59□□□□□ -0.39
USP43-201ENST00000285199 NDUFB8O95169 186 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 TMEM30BQ3MIR4 351 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 PATE2Q6UY27 113 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 ABHD17AQ96GS6 310 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.59□□□□□ -0.39
USP43-201ENST00000285199 A0A1B0GW15 77 aa12.59□□□□□ -0.39
USP43-201ENST00000285199 USP9YO00507 2555 aaPredicted RBP12.58□□□□□ -0.4
USP43-201ENST00000285199 CRXO43186 299 aaPredicted RBP12.58□□□□□ -0.4
USP43-201ENST00000285199 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.4
USP43-201ENST00000285199 TMEM8BA6NDV4 472 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 NPYP01303 97 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 C3orf36Q3SXR2 165 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 DEFB125Q8N687 156 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 KIR2DL4Q99706 377 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 OTOGLQ3ZCN5 2332 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 C9orf118A6NHY6 69 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 IGHV4-39P01824 125 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 HLA-DMBP28068 263 aa12.58□□□□□ -0.4
USP43-201ENST00000285199 CELSR3Q9NYQ7 3312 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 TAX1BP3O14907 124 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
USP43-201ENST00000285199 ARHGAP32A7KAX9 2087 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 PSMB11A5LHX3 300 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 APOBEC3AP31941 199 aaPredicted RBP12.57□□□□□ -0.4
USP43-201ENST00000285199 CKS1BP61024 79 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 NPC2P61916 151 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 MRPL51Q4U2R6 128 aaKnown RBP12.57□□□□□ -0.4
USP43-201ENST00000285199 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
USP43-201ENST00000285199 FAM231DQ6ZW35 169 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 KRTAP27-1Q3LI81 207 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 GDF5OSQ5U4N7 250 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 C14orf178Q8N769 122 aaPredicted RBP12.56□□□□□ -0.4
USP43-201ENST00000285199 RITA1Q96K30 269 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 TRAV2A0A0B4J234 112 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 TRGV3P03979 118 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 DAZAP2Q15038 168 aaPredicted RBP12.56□□□□□ -0.4
USP43-201ENST00000285199 PVRIGQ6DKI7 326 aa12.56□□□□□ -0.4
USP43-201ENST00000285199 EFNA4P52798 201 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 ADIPOQQ15848 244 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 FAM159AQ6UWV7 190 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 ZNF503Q96F45 646 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 SRSF8Q9BRL6 282 aaKnown RBP12.55□□□□□ -0.4
USP43-201ENST00000285199 CHTOPQ9Y3Y2 248 aaKnown RBP12.55□□□□□ -0.4
USP43-201ENST00000285199 IGKV3OR2-268A0A0C4DH90 116 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 C15orf32Q32M92 178 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 FAM104BQ5XKR9 115 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 TNFRSF6BO95407 300 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 MSRB1Q9NZV6 116 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 SPEGQ15772 3267 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 SRSF1Q07955 248 aaKnown RBP eCLIP12.55□□□□□ -0.4
USP43-201ENST00000285199 RAX2Q96IS3 184 aa12.55□□□□□ -0.4
USP43-201ENST00000285199 TMEM249Q2WGJ8 235 aa12.54□□□□□ -0.4
USP43-201ENST00000285199 LINC00322Q6ZN03 302 aaPredicted RBP12.54□□□□□ -0.4
USP43-201ENST00000285199 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
USP43-201ENST00000285199 FAM167A-AS1Q96KT0 104 aa12.54□□□□□ -0.4
USP43-201ENST00000285199 TRAV12-3A0A0B4J271 114 aa12.54□□□□□ -0.4
USP43-201ENST00000285199 USP9XQ93008 2570 aaPredicted RBP12.54□□□□□ -0.4
USP43-201ENST00000285199 B9A039 149 aa12.54□□□□□ -0.4
USP43-201ENST00000285199 TMEM238C9JI98 176 aa12.54□□□□□ -0.4
USP43-201ENST00000285199 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
USP43-201ENST00000285199 H3BRM9 83 aa12.53□□□□□ -0.4
USP43-201ENST00000285199 SNCGO76070 127 aa12.53□□□□□ -0.4
USP43-201ENST00000285199 AZU1P20160 251 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms