RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 PRELID3AQ96N28 172 aa13.36□□□□□ -0.27
SLC52A1-201ENST00000254853 CBY3A6NI87 242 aa13.36□□□□□ -0.27
SLC52A1-201ENST00000254853 S100A7AQ86SG5 101 aa13.36□□□□□ -0.27
SLC52A1-201ENST00000254853 ARPC1AQ92747 370 aa13.36□□□□□ -0.27
SLC52A1-201ENST00000254853 TACC2O95359 2948 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 OR2T8A6NH00 312 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 ODF3BA8MYP8 253 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 GPR183P32249 361 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 PSG9Q00887 426 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 C2orf91Q6ZV80 131 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 ZNF48Q96MX3 618 aaPredicted RBP13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 C21orf62Q9NYP8 219 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 FXYD7P58549 80 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 C21orf62-AS1Q17RA5 79 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 ZNF562Q6V9R5 426 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
SLC52A1-201ENST00000254853 EGR2P11161 476 aaPredicted RBP13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 RBX1P62877 108 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 MRPL51Q4U2R6 128 aaKnown RBP13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 IGFL4Q6B9Z1 124 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 ORMDL3Q8N138 153 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 Q8TAT8 98 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 PRR25Q96S07 402 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 NCBP2LA6PVI3 153 aaKnown RBP13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 RHOGP84095 191 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 DYNAPQ8N1N2 210 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 TTC9CQ8N5M4 171 aa13.34□□□□□ -0.27
SLC52A1-201ENST00000254853 ZNF80P51504 273 aaPredicted RBP13.33□□□□□ -0.28
SLC52A1-201ENST00000254853 VGLL1Q99990 258 aa13.33□□□□□ -0.28
SLC52A1-201ENST00000254853 SMKR1H3BMG3 65 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 RPL7P18124 248 aaKnown RBP13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 PRTN3P24158 256 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 ANKRD39Q53RE8 183 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 SAPCD1Q5SSQ6 148 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 COX8CQ7Z4L0 72 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 SMAD5-AS1Q9Y6J3 95 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 M0R1W7 72 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 CD5LO43866 347 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 PCP4P48539 62 aa13.32□□□□□ -0.28
SLC52A1-201ENST00000254853 IGHV3OR16-8A0A075B7F1 116 aa13.31□□□□□ -0.28
SLC52A1-201ENST00000254853 TIMD4Q96H15 378 aa13.31□□□□□ -0.28
SLC52A1-201ENST00000254853 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
SLC52A1-201ENST00000254853 IGHG4P01861 327 aa13.31□□□□□ -0.28
SLC52A1-201ENST00000254853 FGF6P10767 208 aa13.31□□□□□ -0.28
SLC52A1-201ENST00000254853 TWIST1Q15672 202 aa13.31□□□□□ -0.28
SLC52A1-201ENST00000254853 AMMECR1LQ6DCA0 310 aa13.31□□□□□ -0.28
SLC52A1-201ENST00000254853 NPYP01303 97 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 CTSGP08311 255 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 NHLH1Q02575 133 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 PAX8Q06710 450 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 FER1L6-AS1Q8NA97 138 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 CKS2P33552 79 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 CACNG7P62955 275 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 ZNF575Q86XF7 245 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 THYN1Q9P016 225 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 RABAC1Q9UI14 185 aa13.3□□□□□ -0.28
SLC52A1-201ENST00000254853 ABCA4P78363 2273 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 IGHV3-35A0A0C4DH35 117 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 HBDP02042 147 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 TCTAP57738 103 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 CDSNQ15517 529 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 LGALS9BQ3B8N2 356 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 FBXL19-AS1Q494R0 122 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 LGALS9CQ6DKI2 356 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 VMO1Q7Z5L0 202 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 Q8N6K4 173 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 DCHS2Q6V1P9 2916 aa13.29□□□□□ -0.28
SLC52A1-201ENST00000254853 K7ENP7 123 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 IGLC6P0CF74 106 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 RPS20P60866 119 aaKnown RBP13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 DPF1Q92782 380 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 LRBAP50851 2863 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 CSMD1Q96PZ7 3565 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 TRAV8-6A0A0B4J262 113 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 BMI1P35226 326 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 ARL6IP6Q8N6S5 226 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 MSRB1Q9NZV6 116 aa13.28□□□□□ -0.28
SLC52A1-201ENST00000254853 ANKHD1Q8IWZ3 2542 aaKnown RBP13.27□□□□□ -0.28
SLC52A1-201ENST00000254853 FOXC1Q12948 553 aa13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 CCDC144NLQ6NUI1 221 aa13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 CCL21O00585 134 aa13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 TMEM11P17152 192 aa13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 OR1N2Q8NGR9 330 aa13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 IFI27L1Q96BM0 104 aa13.27□□□□□ -0.29
SLC52A1-201ENST00000254853 TLN1Q9Y490 2541 aaKnown RBP13.26□□□□□ -0.29
SLC52A1-201ENST00000254853 ORM1P02763 201 aa13.26□□□□□ -0.29
SLC52A1-201ENST00000254853 CDKN1BP46527 198 aa13.26□□□□□ -0.29
SLC52A1-201ENST00000254853 ERCC8Q13216 396 aa13.26□□□□□ -0.29
SLC52A1-201ENST00000254853 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
SLC52A1-201ENST00000254853 PSMG3-AS1Q96PY0 264 aa13.26□□□□□ -0.29
SLC52A1-201ENST00000254853 C7orf71A4D174 169 aa13.25□□□□□ -0.29
SLC52A1-201ENST00000254853 UQCRFS1P47985 274 aa13.25□□□□□ -0.29
SLC52A1-201ENST00000254853 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
SLC52A1-201ENST00000254853 PRAC2D3DTV9 90 aa13.25□□□□□ -0.29
SLC52A1-201ENST00000254853 GAS8-AS1O95177 125 aa13.25□□□□□ -0.29
SLC52A1-201ENST00000254853 EBI3Q14213 229 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms