RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 FLNBO75369 2602 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 DOPEY2Q9Y3R5 2298 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 IGHV3-11P01762 117 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 CBLN1P23435 193 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 TMEM95Q3KNT9 176 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 SAPCD1Q5SSQ6 148 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 LCN12Q6JVE5 192 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 TMEM136Q6ZRR5 245 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 ATP5L2Q7Z4Y8 100 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 MYOZ3Q8TDC0 251 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 ZC2HC1AQ96GY0 325 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 NEU1Q99519 415 aa10.97□□□□□ -0.65
RTFDC1-201ENST00000023939 XKRY2A2RUG3 117 aa10.96□□□□□ -0.65
RTFDC1-201ENST00000023939 ELANEP08246 267 aa10.96□□□□□ -0.65
RTFDC1-201ENST00000023939 FOXE3Q13461 319 aa10.96□□□□□ -0.65
RTFDC1-201ENST00000023939 NUP35Q8NFH5 326 aa10.96□□□□□ -0.65
RTFDC1-201ENST00000023939 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-201ENST00000023939 PEF1Q9UBV8 284 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-201ENST00000023939 ABCA12Q86UK0 2595 aa10.96□□□□□ -0.65
RTFDC1-201ENST00000023939 CREBBPQ92793 2442 aa10.96□□□□□ -0.66
RTFDC1-201ENST00000023939 A0A1W2PS18 150 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 K7EMT4 169 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 ZNF207O43670 478 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 HLA-DQA1P01909 254 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 FOXA3P55318 350 aaPredicted RBP10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 SLC35B1P78383 322 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 RNF152Q8N8N0 203 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 TRAV8-2A0A0B4J237 113 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 IGHV3-66A0A0C4DH42 116 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 HIGD1CA8MV81 97 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 SMIM6P0DI80 62 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 GFI1BQ5VTD9 330 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 GPHB5Q86YW7 130 aa10.95□□□□□ -0.66
RTFDC1-201ENST00000023939 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 A0A1B0GXF2 115 aa10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 LCNL1Q6ZST4 164 aa10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 C8orf86Q6ZUL3 223 aa10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 Q71RC1 249 aaPredicted RBP10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 PRR25Q96S07 402 aa10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 GPR61Q9BZJ8 451 aa10.94□□□□□ -0.66
RTFDC1-201ENST00000023939 IGHV3OR16-13A0A075B7E8 117 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 IGHV3-49A0A0A0MS15 119 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 IGHV3-74A0A0B4J1X5 117 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 SMAD7O15105 426 aaKnown RBP10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 CT45A10P0DMU9 189 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 HLA-DMBP28068 263 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 CRIP1P50238 77 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 MRPL54Q6P161 138 aaKnown RBP10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 RBPMS2Q6ZRY4 209 aaKnown RBP10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 GTSF1Q8WW33 167 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 CELSR2Q9HCU4 2923 aa10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 DAZ1Q9NQZ3 744 aaKnown RBP10.93□□□□□ -0.66
RTFDC1-201ENST00000023939 IGHV7-4-1A0A0J9YVY3 117 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 SPINK4O60575 86 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 S100A2P29034 98 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 IGFL4Q6B9Z1 124 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 OR2D3Q8NGH3 330 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 VGLL1Q99990 258 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 PPP1R14DQ9NXH3 145 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 APCP25054 2843 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 SVEP1Q4LDE5 3571 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 ZNF705FA8MVS1 300 aaPredicted RBP10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 CD5LO43866 347 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 KRTAP1-1Q07627 177 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 C8orf49Q96NF6 230 aa10.92□□□□□ -0.66
RTFDC1-201ENST00000023939 PRAC2D3DTV9 90 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 SOCS3O14543 225 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 Q0VG73 95 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 FAM162BQ5T6X4 162 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 Q6AWC8 147 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 C10orf99Q6UWK7 81 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 TCF24Q7RTU0 167 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 C12orf57Q99622 126 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 HIST1H2BLQ99880 126 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 NDFIP1Q9BT67 221 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 SMPXQ9UHP9 88 aa10.91□□□□□ -0.66
RTFDC1-201ENST00000023939 CENPEQ02224 2701 aa10.9□□□□□ -0.66
RTFDC1-201ENST00000023939 RPLP1P05386 114 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-201ENST00000023939 LGALS1P09382 135 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-201ENST00000023939 SRSF2Q01130 221 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-201ENST00000023939 RNF182Q8N6D2 247 aa10.9□□□□□ -0.66
RTFDC1-201ENST00000023939 UFC1Q9Y3C8 167 aa10.9□□□□□ -0.66
RTFDC1-201ENST00000023939 CSMD2Q7Z408 3487 aa10.9□□□□□ -0.67
RTFDC1-201ENST00000023939 APCSP02743 223 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 CRISP2P16562 243 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 BMI1P35226 326 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 HBBP68871 147 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 GDF5OSQ5U4N7 250 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 C9orf47Q6ZRZ4 202 aa10.89□□□□□ -0.67
RTFDC1-201ENST00000023939 C16orf92Q96LL3 132 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms