RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Lyplal1Q3UFF7 239 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Nhlh2Q64221 135 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Znrd1Q791N7 123 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Taf15Q8BQ46 557 aaKnown RBP12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ssxb2Q8C5Z3 165 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Neil3Q8K203 606 aaKnown RBP12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ndufa6Q9CQZ5 131 aaKnown RBP12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Pgpep1lQ9CWB5 130 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Stpg1Q9D2F5 341 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 H2al3Q9D4U4 128 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Foxj2Q9ES18 565 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Hsf4Q9R0L1 492 aa12.11□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1291-ps1A0A286YE47 326 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Lhfpl1Q80SV1 220 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Smco3Q8BQM7 225 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Tsen54Q8C2A2 525 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1411Q8VFC4 323 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Rab29Q91YQ1 204 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ms4a3Q920C4 213 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Tmem116A0A0G2JGD3 401 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm10073E9Q3T0 114 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ninj1O70131 152 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 KncnQ307W7 124 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ubald1Q6P3B2 176 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr860Q8VFF7 317 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr1444Q8VFX2 319 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Tusc2Q9WVF8 110 aa12.1□□□□□ -0.47
Nup88-202ENSMUST00000108530 Med12A2AGH6 2190 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ighv1-47A0A0A6YY41 117 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Trbv26A0A0B4J1P5 115 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gm21882J3QN86 361 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Fabp9O08716 132 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Pla2g2aP31482 146 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Meox2P32443 303 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Taar5Q5QD14 337 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Znf146Q8BQN6 292 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Q9DAL9 119 aa12.09□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ighv14-3A0A075B5R9 117 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Ighv1-18A0A0A6YXN4 117 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 P01759 136 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 CapgP24452 352 aaKnown RBP12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 ElobP62869 118 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr139Q60891 315 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Il22ra2Q80XF5 230 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 1810024B03RikQ8BWE1 200 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Mr1Q8HWB0 341 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 RhovQ8VDU1 236 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Olfr338Q8VGK6 306 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Plekha2Q9ERS5 425 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Gng13Q9JMF3 67 aa12.08□□□□□ -0.47
Nup88-202ENSMUST00000108530 Nbeal1E9PYP2 2688 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Prss2P07146 246 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Hist1h1bP43276 223 aaKnown RBP12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Npy1rQ04573 382 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Tmem52bQ0VBF2 186 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ceacam12Q3UKP4 300 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Arl6ip6Q8BH07 226 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cbln4Q8BME9 198 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Rbm14Q8C2Q3 669 aaKnown RBP12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Dmrtc2Q8CGW9 370 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Plppr2Q8VCY8 343 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr1155Q8VFR3 314 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr1272Q8VGN8 308 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Scrt1Q99M85 348 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Smim8Q9CQQ0 97 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Fam210bQ9D8B6 190 aa12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Sptbn1Q62261 2363 aaKnown RBP12.08□□□□□ -0.48
Nup88-202ENSMUST00000108530 Rpl27aP14115 148 aaKnown RBP12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Cdkn1aP39689 159 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Rnf150Q5DTZ6 437 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Sft2d1Q5SSN7 159 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Mex3bQ69Z36 601 aaKnown RBP12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr138Q7TRI7 312 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 9130230L23RikQ8CC80 163 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr1457Q8VFK3 317 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr344Q8VFP9 309 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Gar1Q9CY66 231 aaKnown RBP12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Tmem219Q9D123 240 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Mrpl30Q9D7N6 160 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Trem3Q9JKE1 183 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Abca12E9Q876 2595 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Trav6-1A0A075B5Z8 112 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ighv9-3A0A0B4J1J5 117 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Mtnd6P03925 172 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Pdlim4P70271 330 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Dlx6P70397 175 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 MyocosQ3UWS6 143 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 PhyhiplQ8BGT8 375 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Sft2d2Q8VD57 159 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Olfr1099Q8VG37 312 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ubtd1Q91WB7 227 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Mpped1Q91ZG2 326 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Bpifa5Q9CQX3 270 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Rab1bQ9D1G1 201 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 BlnkQ9QUN3 457 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ccpg1osV9GXK1 122 aa12.07□□□□□ -0.48
Nup88-202ENSMUST00000108530 Esp8F7AMQ8 149 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 Ren2P00796 401 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 P01796 113 aa12.06□□□□□ -0.48
Nup88-202ENSMUST00000108530 P01797 113 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms