Protein–RNA interactions for Protein: Q920C4

Ms4a3, Membrane-spanning 4-domains subfamily A member 3, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a3Q920C4 Gm25239-201ENSMUST00000174915 86 ntBASIC32.39■■■□□ 2.78
Ms4a3Q920C4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Ms4a3Q920C4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ms4a3Q920C4 Gm15042-201ENSMUST00000120212 883 ntBASIC28.23■■■□□ 2.11
Ms4a3Q920C4 Gm24109-201ENSMUST00000175489 103 ntBASIC28.1■■■□□ 2.09
Ms4a3Q920C4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ms4a3Q920C4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ms4a3Q920C4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ms4a3Q920C4 Gm15045-201ENSMUST00000117359 883 ntBASIC27.48■■□□□ 1.99
Ms4a3Q920C4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ms4a3Q920C4 Gm23366-201ENSMUST00000175022 89 ntBASIC27.15■■□□□ 1.94
Ms4a3Q920C4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ms4a3Q920C4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ms4a3Q920C4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Ms4a3Q920C4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ms4a3Q920C4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.23■■□□□ 1.79
Ms4a3Q920C4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ms4a3Q920C4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
Ms4a3Q920C4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.97■■□□□ 1.75
Ms4a3Q920C4 Psd-208ENSMUST00000224556 2034 ntBASIC25.93■■□□□ 1.74
Ms4a3Q920C4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ms4a3Q920C4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.77■■□□□ 1.72
Ms4a3Q920C4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ms4a3Q920C4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ms4a3Q920C4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ms4a3Q920C4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ms4a3Q920C4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ms4a3Q920C4 Gm25238-201ENSMUST00000174914 89 ntBASIC25.57■■□□□ 1.68
Ms4a3Q920C4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.57■■□□□ 1.68
Ms4a3Q920C4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ms4a3Q920C4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ms4a3Q920C4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ms4a3Q920C4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ms4a3Q920C4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
Ms4a3Q920C4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ms4a3Q920C4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ms4a3Q920C4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.16■■□□□ 1.62
Ms4a3Q920C4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ms4a3Q920C4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ms4a3Q920C4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ms4a3Q920C4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Ms4a3Q920C4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.97■■□□□ 1.59
Ms4a3Q920C4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.97■■□□□ 1.59
Ms4a3Q920C4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ms4a3Q920C4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ms4a3Q920C4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ms4a3Q920C4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ms4a3Q920C4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.75■■□□□ 1.55
Ms4a3Q920C4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ms4a3Q920C4 Gm25262-201ENSMUST00000174934 133 ntBASIC24.72■■□□□ 1.55
Ms4a3Q920C4 Gm27325-201ENSMUST00000175467 74 ntBASIC24.71■■□□□ 1.55
Ms4a3Q920C4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.65■■□□□ 1.54
Ms4a3Q920C4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ms4a3Q920C4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.42■■□□□ 1.5
Ms4a3Q920C4 Rab21-202ENSMUST00000218831 843 ntBASIC24.4■■□□□ 1.5
Ms4a3Q920C4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ms4a3Q920C4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ms4a3Q920C4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ms4a3Q920C4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.35■■□□□ 1.49
Ms4a3Q920C4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.3■■□□□ 1.48
Ms4a3Q920C4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ms4a3Q920C4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ms4a3Q920C4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.23■■□□□ 1.47
Ms4a3Q920C4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.22■■□□□ 1.47
Ms4a3Q920C4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ms4a3Q920C4 Gm26115-201ENSMUST00000175605 87 ntBASIC24.17■■□□□ 1.46
Ms4a3Q920C4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ms4a3Q920C4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ms4a3Q920C4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ms4a3Q920C4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ms4a3Q920C4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ms4a3Q920C4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Ms4a3Q920C4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ms4a3Q920C4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Ms4a3Q920C4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ms4a3Q920C4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
Ms4a3Q920C4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ms4a3Q920C4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.91■■□□□ 1.42
Ms4a3Q920C4 Gm8109-201ENSMUST00000194076 746 ntBASIC23.89■■□□□ 1.41
Ms4a3Q920C4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Ms4a3Q920C4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.86■■□□□ 1.41
Ms4a3Q920C4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ms4a3Q920C4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Ms4a3Q920C4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.84■■□□□ 1.41
Ms4a3Q920C4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.84■■□□□ 1.41
Ms4a3Q920C4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ms4a3Q920C4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ms4a3Q920C4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ms4a3Q920C4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ms4a3Q920C4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ms4a3Q920C4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ms4a3Q920C4 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.62■■□□□ 1.37
Ms4a3Q920C4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ms4a3Q920C4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ms4a3Q920C4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.6■■□□□ 1.37
Ms4a3Q920C4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ms4a3Q920C4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ms4a3Q920C4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.55■■□□□ 1.36
Ms4a3Q920C4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ms4a3Q920C4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 270.5 ms