Protein–RNA interactions for Protein: Q8BME9

Cbln4, Cerebellin-4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbln4Q8BME9 Gm25239-201ENSMUST00000174915 86 ntBASIC32.66■■■□□ 2.82
Cbln4Q8BME9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Cbln4Q8BME9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Cbln4Q8BME9 Gm15042-201ENSMUST00000120212 883 ntBASIC28.55■■■□□ 2.16
Cbln4Q8BME9 Gm24109-201ENSMUST00000175489 103 ntBASIC28.26■■■□□ 2.11
Cbln4Q8BME9 Gm15045-201ENSMUST00000117359 883 ntBASIC27.87■■■□□ 2.05
Cbln4Q8BME9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Cbln4Q8BME9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cbln4Q8BME9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cbln4Q8BME9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.54■■■□□ 2
Cbln4Q8BME9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cbln4Q8BME9 Gm23366-201ENSMUST00000175022 89 ntBASIC27.32■■□□□ 1.96
Cbln4Q8BME9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cbln4Q8BME9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Cbln4Q8BME9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cbln4Q8BME9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cbln4Q8BME9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Cbln4Q8BME9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.38■■□□□ 1.81
Cbln4Q8BME9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.3■■□□□ 1.8
Cbln4Q8BME9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cbln4Q8BME9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.18■■□□□ 1.78
Cbln4Q8BME9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cbln4Q8BME9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
Cbln4Q8BME9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cbln4Q8BME9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cbln4Q8BME9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cbln4Q8BME9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cbln4Q8BME9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cbln4Q8BME9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cbln4Q8BME9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cbln4Q8BME9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.83■■□□□ 1.73
Cbln4Q8BME9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.77■■□□□ 1.72
Cbln4Q8BME9 Gm25238-201ENSMUST00000174914 89 ntBASIC25.76■■□□□ 1.71
Cbln4Q8BME9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cbln4Q8BME9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cbln4Q8BME9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cbln4Q8BME9 Psd-208ENSMUST00000224556 2034 ntBASIC25.5■■□□□ 1.67
Cbln4Q8BME9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cbln4Q8BME9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
Cbln4Q8BME9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.3■■□□□ 1.64
Cbln4Q8BME9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cbln4Q8BME9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.18■■□□□ 1.62
Cbln4Q8BME9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Cbln4Q8BME9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.04■■□□□ 1.6
Cbln4Q8BME9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cbln4Q8BME9 Gm27325-201ENSMUST00000175467 74 ntBASIC25.01■■□□□ 1.59
Cbln4Q8BME9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Cbln4Q8BME9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Cbln4Q8BME9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cbln4Q8BME9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.9■■□□□ 1.58
Cbln4Q8BME9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cbln4Q8BME9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.88■■□□□ 1.57
Cbln4Q8BME9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cbln4Q8BME9 Gm25262-201ENSMUST00000174934 133 ntBASIC24.75■■□□□ 1.55
Cbln4Q8BME9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cbln4Q8BME9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.65■■□□□ 1.54
Cbln4Q8BME9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cbln4Q8BME9 Rab21-202ENSMUST00000218831 843 ntBASIC24.59■■□□□ 1.53
Cbln4Q8BME9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.58■■□□□ 1.53
Cbln4Q8BME9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cbln4Q8BME9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cbln4Q8BME9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.52■■□□□ 1.52
Cbln4Q8BME9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cbln4Q8BME9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cbln4Q8BME9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cbln4Q8BME9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
Cbln4Q8BME9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.37■■□□□ 1.49
Cbln4Q8BME9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cbln4Q8BME9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.28■■□□□ 1.48
Cbln4Q8BME9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.26■■□□□ 1.47
Cbln4Q8BME9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Cbln4Q8BME9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Cbln4Q8BME9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cbln4Q8BME9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cbln4Q8BME9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cbln4Q8BME9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cbln4Q8BME9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Cbln4Q8BME9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cbln4Q8BME9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.16■■□□□ 1.46
Cbln4Q8BME9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cbln4Q8BME9 Gm26115-201ENSMUST00000175605 87 ntBASIC24.14■■□□□ 1.45
Cbln4Q8BME9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cbln4Q8BME9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cbln4Q8BME9 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.09■■□□□ 1.45
Cbln4Q8BME9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cbln4Q8BME9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cbln4Q8BME9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cbln4Q8BME9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cbln4Q8BME9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cbln4Q8BME9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cbln4Q8BME9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cbln4Q8BME9 Gm8109-201ENSMUST00000194076 746 ntBASIC23.96■■□□□ 1.43
Cbln4Q8BME9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.96■■□□□ 1.43
Cbln4Q8BME9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.96■■□□□ 1.43
Cbln4Q8BME9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cbln4Q8BME9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cbln4Q8BME9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.88■■□□□ 1.41
Cbln4Q8BME9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.88■■□□□ 1.41
Cbln4Q8BME9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
Cbln4Q8BME9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms