RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 WT1-ASQ06250 92 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 FMC1Q96HJ9 113 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 TRAV21A0A0B4J279 112 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 WIPF3A6NGB9 483 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 DEFB130BP0DP73 79 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 DEFB130AP0DP74 79 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 OR11H1Q8NG94 326 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 JKAMPQ9P055 326 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 PLXNB3Q9ULL4 1909 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 EML6Q6ZMW3 1958 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 TAS2R60P59551 318 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 ZNF415Q09FC8 603 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 C1QL4Q86Z23 238 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 XCL2Q9UBD3 114 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 ZMAT5Q9UDW3 170 aaKnown RBP8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 CDC42EP3Q9UKI2 254 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 IGHV2-70P01814 119 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 EVI2AP22794 236 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 BLCAPP62952 87 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 Q6ZS49 121 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 USMG5Q96IX5 58 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 PMCHL2Q9BQD1 86 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 DAZ1Q9NQZ3 744 aaKnown RBP8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 USP24Q9UPU5 2620 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 TRGV1A0A0A0MS02 117 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 APOHP02749 345 aaPredicted RBP8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 RNF182Q8N6D2 247 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 OR10AG1Q8NH19 301 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 IL36BQ9NZH7 164 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 TRBV7-1A0A0A6YYK4 115 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 FBLL1A6NHQ2 334 aaKnown RBP8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 TRGV9Q99603 122 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 TMEM160Q9NX00 188 aa8.13□□□□□ -1.11
SMARCA1-205ENST00000617310 DCHS1Q96JQ0 3298 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 CHD7Q9P2D1 2997 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 H7C1H1 209 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 CYTL1Q9NRR1 136 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 TRAV8-6A0A0B4J262 113 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 SAMD13Q5VXD3 122 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 SNAI2O43623 268 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 IGLV3-1P01715 115 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 ERCC8Q13216 396 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 IFT22Q9H7X7 185 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 KAAG1Q9UBP8 84 aa8.12□□□□□ -1.11
SMARCA1-205ENST00000617310 KNCNA6PVL3 124 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 NCR2O95944 276 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 ZNF25P17030 456 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 LCN12Q6JVE5 192 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 DENND4AQ7Z401 1863 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 ZFP30Q9Y2G7 519 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 A0A087X0M5 115 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 A0A1B0GX30 115 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 TCTEX1D4Q5JR98 221 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 TCRAP04437 139 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 CHCHD5Q9BSY4 110 aa8.11□□□□□ -1.11
SMARCA1-205ENST00000617310 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 ZNF833PQ6ZTB9 187 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 TMEM14BQ9NUH8 114 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 OVOL1O14753 267 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 PPP1R17O96001 155 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 PAX1P15863 534 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 C9orf139Q6ZV77 190 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 NDUFA4L2Q9NRX3 87 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 TCF21O43680 179 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 ORMDL3Q8N138 153 aa8.1□□□□□ -1.11
SMARCA1-205ENST00000617310 RNASE1P07998 156 aaKnown RBP8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 ZNF138P52744 262 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 CFHR3Q02985 330 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 C10orf105Q8TEF2 133 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 F8P00451 2351 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 CXorf65A6NEN9 183 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 ITGB1BP1O14713 200 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 MBD3L1Q8WWY6 194 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 SCGB3A1Q96QR1 104 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 NRN1Q9NPD7 142 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 OBSL1O75147 1896 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 ZFP36P26651 326 aaKnown RBP8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 RCHY1Q96PM5 261 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 PRDM13Q9H4Q3 707 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 PRORYQ9H606 182 aa8.09□□□□□ -1.11
SMARCA1-205ENST00000617310 FAM223BA6NKX1 122 aa8.09□□□□□ -1.12
SMARCA1-205ENST00000617310 LEPP41159 167 aa8.09□□□□□ -1.12
SMARCA1-205ENST00000617310 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.12
SMARCA1-205ENST00000617310 FAM209BQ5JX69 171 aa8.09□□□□□ -1.12
SMARCA1-205ENST00000617310 FAM223AQ8IWN6 122 aa8.09□□□□□ -1.12
SMARCA1-205ENST00000617310 MRAPQ8TCY5 172 aa8.09□□□□□ -1.12
SMARCA1-205ENST00000617310 CHD3Q12873 2000 aaKnown RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 HOXB4P17483 251 aaPredicted RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 NUDT10Q8NFP7 164 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 ST6GALNAC6Q969X2 333 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 NUDT11Q96G61 164 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 FOXC2Q99958 501 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 PARD6GQ9BYG4 376 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms