RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 C11orf53Q8IXP5 236 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 ACACAQ13085 2346 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 TMEM213A2RRL7 107 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 SYT8Q8NBV8 401 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
VPS36-207ENST00000611132 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 Q8TAT8 98 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 IGHV1-3A0A0C4DH29 117 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 CKS1BP61024 79 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 SHANK2-AS3Q9BTD1 123 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 IGHG3P01860 377 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 FAM74A4Q5TZK3 123 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 TMEM75Q8N9X5 138 aa11.79□□□□□ -0.52
VPS36-207ENST00000611132 TMEM178BH3BS89 294 aa11.78□□□□□ -0.52
VPS36-207ENST00000611132 FAM159AQ6UWV7 190 aa11.78□□□□□ -0.52
VPS36-207ENST00000611132 FAM57AQ8TBR7 257 aa11.78□□□□□ -0.52
VPS36-207ENST00000611132 ZNF747Q9BV97 191 aa11.78□□□□□ -0.52
VPS36-207ENST00000611132 RNASE6Q93091 150 aaKnown RBP11.78□□□□□ -0.52
VPS36-207ENST00000611132 P0C879 139 aa11.78□□□□□ -0.52
VPS36-207ENST00000611132 ZNF833PQ6ZTB9 187 aa11.78□□□□□ -0.52
VPS36-207ENST00000611132 A0A1W2PPM0 123 aa11.77□□□□□ -0.52
VPS36-207ENST00000611132 A8MWV9 139 aa11.77□□□□□ -0.52
VPS36-207ENST00000611132 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.52
VPS36-207ENST00000611132 IGF2BP2-AS1Q96M15 143 aa11.77□□□□□ -0.52
VPS36-207ENST00000611132 JMJD8Q96S16 334 aa11.77□□□□□ -0.52
VPS36-207ENST00000611132 GTF3C1Q12789 2109 aa11.77□□□□□ -0.52
VPS36-207ENST00000611132 TMEM262E9PQX1 116 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 C2orf16Q68DN1 1984 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 TNCP24821 2201 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 TRAV8-2A0A0B4J237 113 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 PF4V1P10720 104 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 PLNP26678 52 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 PRSS57Q6UWY2 283 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 TEX29Q8N6K0 151 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 THAP8Q8NA92 274 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 SIGLEC8Q9NYZ4 499 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 CREBBPQ92793 2442 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 CLEC19AQ6UXS0 136 aa11.77□□□□□ -0.53
VPS36-207ENST00000611132 PDE6HQ13956 83 aa11.76□□□□□ -0.53
VPS36-207ENST00000611132 ZNF56Q15929 161 aa11.76□□□□□ -0.53
VPS36-207ENST00000611132 RNF5Q99942 180 aa11.76□□□□□ -0.53
VPS36-207ENST00000611132 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
VPS36-207ENST00000611132 ANAPC13Q9BS18 74 aa11.76□□□□□ -0.53
VPS36-207ENST00000611132 LTAP01374 205 aa11.76□□□□□ -0.53
VPS36-207ENST00000611132 GATA4P43694 442 aa11.76□□□□□ -0.53
VPS36-207ENST00000611132 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 CCL21O00585 134 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 TAX1BP3O14907 124 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 FOXC1Q12948 553 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 DLX4Q92988 240 aaPredicted RBP11.75□□□□□ -0.53
VPS36-207ENST00000611132 TNFRSF6BO95407 300 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 SSBP2P81877 361 aaPredicted RBP11.75□□□□□ -0.53
VPS36-207ENST00000611132 RHOGP84095 191 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 ABCA4P78363 2273 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 MRPL51Q4U2R6 128 aaKnown RBP11.75□□□□□ -0.53
VPS36-207ENST00000611132 TSSC4Q9Y5U2 329 aaPredicted RBP11.75□□□□□ -0.53
VPS36-207ENST00000611132 PLCE1Q9P212 2302 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 MED13Q9UHV7 2174 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 MED13LQ71F56 2210 aa11.75□□□□□ -0.53
VPS36-207ENST00000611132 LYNX1G3V0Z9 82 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 SIVA1O15304 175 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 LYNX1P0DP58 116 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 EMP1P54849 157 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 CD300EQ496F6 205 aaPredicted RBP11.74□□□□□ -0.53
VPS36-207ENST00000611132 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 H7C1H1 209 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 CSTL1Q9H114 145 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 UBTD1Q9HAC8 227 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 TP53TG3Q9ULZ0 132 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 TRAV40A0A0B4J280 105 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 MBD3L4A6NDZ8 208 aaPredicted RBP11.74□□□□□ -0.53
VPS36-207ENST00000611132 MBD3L3A6NE82 208 aaPredicted RBP11.74□□□□□ -0.53
VPS36-207ENST00000611132 MBD3L5A6NJ08 208 aaPredicted RBP11.74□□□□□ -0.53
VPS36-207ENST00000611132 MORN5Q5VZ52 161 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 MBD3L2Q8NHZ7 208 aaPredicted RBP11.74□□□□□ -0.53
VPS36-207ENST00000611132 ZC2HC1AQ96GY0 325 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 TMEM14CQ9P0S9 112 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 MALRD1Q5VYJ5 2156 aa11.74□□□□□ -0.53
VPS36-207ENST00000611132 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
VPS36-207ENST00000611132 ZNF474Q6S9Z5 364 aaPredicted RBP11.74□□□□□ -0.53
VPS36-207ENST00000611132 LYPD2Q6UXB3 125 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 LINC01560Q8TB33 94 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 Q8TCH9 128 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 SCRT2Q9NQ03 307 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 PGPEP1Q9NXJ5 209 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 TMEM8BA6NDV4 472 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 TMEM238C9JI98 176 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 FAM167A-AS1Q96KT0 104 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 C8orf49Q96NF6 230 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 EML6Q6ZMW3 1958 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 IGLV1-44P01699 117 aa11.73□□□□□ -0.53
VPS36-207ENST00000611132 LINC01545Q5VT33 79 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms