RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 CLEC19AQ6UXS0 136 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 DTX1Q86Y01 620 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 PCNX1Q96RV3 2341 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 PLCE1Q9P212 2302 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 SLC25A15Q9Y619 301 aa10.61□□□□□ -0.71
PCDHGB3-201ENST00000576222 TIMM23O14925 209 aa10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 ZNF134P52741 427 aa10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 TMEM105Q8N8V8 129 aa10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 SPTAN1Q13813 2472 aaKnown RBP10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 ODF3L1Q8IXM7 274 aa10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 PRDM6Q9NQX0 595 aa10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 TMEM238C9JI98 176 aa10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 Q6ZR03 302 aa10.6□□□□□ -0.71
PCDHGB3-201ENST00000576222 FRMD6-AS1P0C7T7 363 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 IGHV1-8P0DP01 117 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 SIGLEC9Q9Y336 463 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 TRAV40A0A0B4J280 105 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 H7C1H1 209 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 CCL21O00585 134 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 MDS2Q8NDY4 140 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 FXYD5Q96DB9 178 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
PCDHGB3-201ENST00000576222 ACACAQ13085 2346 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 SCGB1A1P11684 91 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 ZNF562Q6V9R5 426 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 TRAV2A0A0B4J234 112 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 CEACAM4O75871 244 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 PRTN3P24158 256 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 ZNF747Q9BV97 191 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 RIF1Q5UIP0 2472 aaKnown RBP10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 IGHV1-3A0A0C4DH29 117 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 TNFRSF6BO95407 300 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 SHANK2-AS3Q9BTD1 123 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 SIGLEC8Q9NYZ4 499 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 TRGV3P03979 118 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 MED13LQ71F56 2210 aa10.58□□□□□ -0.72
PCDHGB3-201ENST00000576222 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 TMEM8BA6NDV4 472 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 F8W1H4 67 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 KLRB1Q12918 225 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 KRTAP27-1Q3LI81 207 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 FAM106AQ4KMX7 169 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 ERG28Q9UKR5 140 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 C17orf58Q2M2W7 97 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 TMEM75Q8N9X5 138 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 PSMB11A5LHX3 300 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 AZU1P20160 251 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 WT1-ASQ06250 92 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 FREM1Q5H8C1 2179 aa10.57□□□□□ -0.72
PCDHGB3-201ENST00000576222 SAP30O75446 220 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 RHOGP84095 191 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 TRAV8-4A0A0B4J246 113 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 MRPL51Q4U2R6 128 aaKnown RBP10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 C19orf54Q5BKX5 351 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 PCNX3Q9H6A9 2034 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 PRSS46E5RG02 174 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 TAX1BP3O14907 124 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 SIVA1O15304 175 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 RNASE6Q93091 150 aaKnown RBP10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 IGFL4Q6B9Z1 124 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 LINC01560Q8TB33 94 aa10.56□□□□□ -0.72
PCDHGB3-201ENST00000576222 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 LYNX1G3V0Z9 82 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 TMEM178BH3BS89 294 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 LYNX1P0DP58 116 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 PAX1P15863 534 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 PDE6HQ13956 83 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 FAM57AQ8TBR7 257 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 SRRM4A7MD48 611 aaKnown RBP10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 PLA2G5P39877 138 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 CRIP3Q6Q6R5 217 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 DOPEY2Q9Y3R5 2298 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 TRBV19A0A075B6N1 114 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 ATP6V0BQ99437 205 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 VGLL1Q99990 258 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 DKK1O94907 266 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 RNF5Q99942 180 aa10.55□□□□□ -0.72
PCDHGB3-201ENST00000576222 LINC01549A6NIU2 74 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 IGLV2-14P01704 120 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 C8orf49Q96NF6 230 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 DNAL4O96015 105 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 Q6ZPA2 131 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 GLMPQ8WWB7 406 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 ABCA4P78363 2273 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 ZNF295-AS1Q8N0V1 137 aa10.54□□□□□ -0.72
PCDHGB3-201ENST00000576222 SUMO2P61956 95 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms