RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 PLAC8L1A1L4L8 177 aa14.61□□□□□ -0.07
HERC2-204ENST00000563945 CDKN1BP46527 198 aa14.61□□□□□ -0.07
HERC2-204ENST00000563945 CCDC28AQ8IWP9 274 aa14.61□□□□□ -0.07
HERC2-204ENST00000563945 RPUSD4Q96CM3 377 aaKnown RBP14.61□□□□□ -0.07
HERC2-204ENST00000563945 GNPNAT1Q96EK6 184 aaPredicted RBP14.61□□□□□ -0.07
HERC2-204ENST00000563945 Q9H8V8 135 aa14.61□□□□□ -0.07
HERC2-204ENST00000563945 H7BYZ3 331 aa14.6□□□□□ -0.07
HERC2-204ENST00000563945 TTC32Q5I0X7 151 aa14.6□□□□□ -0.07
HERC2-204ENST00000563945 UHRF2Q96PU4 802 aa14.6□□□□□ -0.07
HERC2-204ENST00000563945 SLIRPQ9GZT3 109 aaKnown RBP14.6□□□□□ -0.07
HERC2-204ENST00000563945 ARL6Q9H0F7 186 aa14.6□□□□□ -0.07
HERC2-204ENST00000563945 A0A087X0K7 114 aa14.59□□□□□ -0.07
HERC2-204ENST00000563945 PLP1P60201 277 aa14.59□□□□□ -0.07
HERC2-204ENST00000563945 POLR2GP62487 172 aaKnown RBP eCLIP14.59□□□□□ -0.07
HERC2-204ENST00000563945 TMEM263Q8WUH6 116 aaKnown RBP14.59□□□□□ -0.07
HERC2-204ENST00000563945 RRAS2P62070 204 aaPredicted RBP14.58□□□□□ -0.08
HERC2-204ENST00000563945 ID3Q02535 119 aa14.58□□□□□ -0.08
HERC2-204ENST00000563945 SPATA12Q7Z6I5 190 aa14.58□□□□□ -0.08
HERC2-204ENST00000563945 DEDD2Q8WXF8 326 aa14.58□□□□□ -0.08
HERC2-204ENST00000563945 NPVFQ9HCQ7 196 aa14.58□□□□□ -0.08
HERC2-204ENST00000563945 MGAT4CQ9UBM8 478 aa14.58□□□□□ -0.08
HERC2-204ENST00000563945 OR10P1Q8NGE3 313 aa14.57□□□□□ -0.08
HERC2-204ENST00000563945 C20orf144Q9BQM9 153 aa14.57□□□□□ -0.08
HERC2-204ENST00000563945 ARV1Q9H2C2 271 aa14.57□□□□□ -0.08
HERC2-204ENST00000563945 TRAV26-1A0A087WT03 109 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 GOSR2O14653 212 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 SSSCA1O60232 199 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 CXCL2P19875 107 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 M6PRP20645 277 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 UBE2MP61081 183 aaKnown RBP14.56□□□□□ -0.08
HERC2-204ENST00000563945 DLK1P80370 383 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 PXDC1Q5TGL8 231 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 TEPPQ6URK8 271 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 LCN15Q6UWW0 184 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 CCDC190Q86UF4 302 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 RXFP4Q8TDU9 374 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 TRIM63Q969Q1 353 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 SMIM8Q96KF7 97 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 SLC50A1Q9BRV3 221 aa14.56□□□□□ -0.08
HERC2-204ENST00000563945 A0A0J9YY99 117 aa14.55□□□□□ -0.08
HERC2-204ENST00000563945 PMS2P5A8MQ11 134 aa14.55□□□□□ -0.08
HERC2-204ENST00000563945 SNURFLB1AK76 121 aa14.55□□□□□ -0.08
HERC2-204ENST00000563945 RLN2P04090 185 aa14.55□□□□□ -0.08
HERC2-204ENST00000563945 METTL15P1P0C7V9 234 aa14.55□□□□□ -0.08
HERC2-204ENST00000563945 PRB4P10163 310 aaPredicted RBP14.55□□□□□ -0.08
HERC2-204ENST00000563945 S100A5P33763 92 aa14.55□□□□□ -0.08
HERC2-204ENST00000563945 RNASE8Q8TDE3 154 aaKnown RBP14.55□□□□□ -0.08
HERC2-204ENST00000563945 ZNF503Q96F45 646 aa14.55□□□□□ -0.08
HERC2-204ENST00000563945 H3BMQ9 156 aa14.54□□□□□ -0.08
HERC2-204ENST00000563945 INPP1P49441 399 aa14.54□□□□□ -0.08
HERC2-204ENST00000563945 BPIFA4PQ86YQ2 179 aa14.54□□□□□ -0.08
HERC2-204ENST00000563945 Q8N1X5 172 aa14.54□□□□□ -0.08
HERC2-204ENST00000563945 HSPG2P98160 4391 aa14.54□□□□□ -0.08
HERC2-204ENST00000563945 GAGE12BA1L429 117 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 C9orf170A2RU37 121 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 FNDC10F2Z333 226 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 GAGE7O76087 117 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 SCGB1D2O95969 90 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 GAGE12FP0CL80 117 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 GAGE12GP0CL81 117 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 GAGE12IP0CL82 117 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 SLC38A11Q08AI6 406 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 LINC00305Q7Z4B0 112 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 ZNF546Q86UE3 836 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 SCRT2Q9NQ03 307 aa14.53□□□□□ -0.08
HERC2-204ENST00000563945 ZNF331Q9NQX6 463 aaPredicted RBP14.53□□□□□ -0.08
HERC2-204ENST00000563945 ZNF701M0R085 212 aaPredicted RBP14.52□□□□□ -0.09
HERC2-204ENST00000563945 SNRPCP09234 159 aaKnown RBP14.52□□□□□ -0.09
HERC2-204ENST00000563945 PATE2Q6UY27 113 aa14.52□□□□□ -0.09
HERC2-204ENST00000563945 Q9H3A6 140 aa14.52□□□□□ -0.09
HERC2-204ENST00000563945 A0A1W2PPQ1 181 aa14.51□□□□□ -0.09
HERC2-204ENST00000563945 K7EPK0 472 aa14.51□□□□□ -0.09
HERC2-204ENST00000563945 COX7A2P2O60397 106 aa14.51□□□□□ -0.09
HERC2-204ENST00000563945 CCNKO75909 580 aa14.51□□□□□ -0.09
HERC2-204ENST00000563945 J3KRW8 73 aa14.5□□□□□ -0.09
HERC2-204ENST00000563945 MRPS12O15235 138 aaKnown RBP14.5□□□□□ -0.09
HERC2-204ENST00000563945 LEPP41159 167 aa14.5□□□□□ -0.09
HERC2-204ENST00000563945 GFI1BQ5VTD9 330 aa14.5□□□□□ -0.09
HERC2-204ENST00000563945 TMEM14EPQ6UXP3 125 aa14.5□□□□□ -0.09
HERC2-204ENST00000563945 PARD6GQ9BYG4 376 aaPredicted RBP14.5□□□□□ -0.09
HERC2-204ENST00000563945 PXMP4Q9Y6I8 212 aa14.5□□□□□ -0.09
HERC2-204ENST00000563945 H3BNG1 76 aa14.49□□□□□ -0.09
HERC2-204ENST00000563945 BTF3P20290 206 aaKnown RBP14.49□□□□□ -0.09
HERC2-204ENST00000563945 KIR3DS1Q14943 382 aa14.49□□□□□ -0.09
HERC2-204ENST00000563945 ESRGQ1W209 222 aa14.49□□□□□ -0.09
HERC2-204ENST00000563945 UPK3BQ9BT76 320 aa14.49□□□□□ -0.09
HERC2-204ENST00000563945 GSKIPQ9P0R6 139 aa14.49□□□□□ -0.09
HERC2-204ENST00000563945 V9GYH0 126 aa14.49□□□□□ -0.09
HERC2-204ENST00000563945 LRP1BQ9NZR2 4599 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 NAP1L6A6NFF2 107 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 H3BTX0 84 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 AGPAT2O15120 278 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 TSC22D2O75157 780 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 HOXA5P20719 270 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 TAS2R30P59541 319 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 RAB31Q13636 194 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 IAH1Q2TAA2 248 aaPredicted RBP14.48□□□□□ -0.09
HERC2-204ENST00000563945 C4orf46Q504U0 113 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 C10orf113Q5VZT2 155 aa14.48□□□□□ -0.09
HERC2-204ENST00000563945 LINC00612Q8N6U2 182 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms