RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 SYNGR2O43760 224 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 DEFA4P12838 97 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 FABP4P15090 132 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 ZNF22P17026 224 aaPredicted RBP2.87□□□□□ -1.95
C11orf54-213ENST00000533585 FUSP35637 526 aaKnown RBP eCLIP2.87□□□□□ -1.95
C11orf54-213ENST00000533585 PCBD1P61457 104 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 HSD52Q0P140 79 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 FAM27BQ5VT28 67 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 Q6ZS52 159 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 SLC35E3Q7Z769 313 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 Q8NAQ8 132 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 SFT2D1Q8WV19 159 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 OR8B2Q96RD0 313 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 KRTAP17-1Q9BYP8 105 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 SAR1AQ9NR31 198 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 KIF25-AS1Q9Y6Z4 181 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 MYOM2P54296 1465 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 LRRC9Q6ZRR7 1453 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 KIF21AQ7Z4S6 1674 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 AGRNO00468 2067 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 TIAM1Q13009 1591 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 TTC37Q6PGP7 1564 aa2.87□□□□□ -1.95
C11orf54-213ENST00000533585 HFM1A2PYH4 1435 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 UACAQ9BZF9 1416 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 KIAA1107Q9UPP5 1409 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 PZPP20742 1482 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 ARHGAP35Q9NRY4 1499 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 ARHGEF28Q8N1W1 1705 aaKnown RBP2.86□□□□□ -1.95
C11orf54-213ENST00000533585 TRBV20-1A0A075B6N2 111 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 TRAV12-2A0A075B6T6 113 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 A0A1B0GU33 70 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 A0A1B0GVG6 124 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 LOC107986453A0A1B0GWG9 222 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 GNRH2O43555 120 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 RBP4P02753 201 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 BLCAPP62952 87 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 PABPC1L2AQ5JQF8 200 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 LINC01545Q5VT33 79 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 GKN2Q86XP6 184 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 RETNLBQ9BQ08 111 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 SLC35B3Q9H1N7 401 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 FKBP11Q9NYL4 201 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 LSM2Q9Y333 95 aaKnown RBP2.86□□□□□ -1.95
C11orf54-213ENST00000533585 IER3IP1Q9Y5U9 82 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 MINOS1-NBL1R4GNA1 71 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 S4R3C0 116 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 ABCA10Q8WWZ4 1543 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 ZNF318Q5VUA4 2279 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 ZNF646O15015 1829 aaPredicted RBP2.86□□□□□ -1.95
C11orf54-213ENST00000533585 NUP98P52948 1817 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 TRPM1Q7Z4N2 1603 aa2.86□□□□□ -1.95
C11orf54-213ENST00000533585 COL1A1P02452 1464 aaPredicted RBP2.85□□□□□ -1.95
C11orf54-213ENST00000533585 ABCC10Q5T3U5 1492 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 IGHV3OR16-8A0A075B7F1 116 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 OR1I1O60431 355 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 YPEL1O60688 119 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 TNFP01375 233 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 SAA1P0DJI8 122 aaPredicted RBP2.85□□□□□ -1.95
C11orf54-213ENST00000533585 SS18Q15532 418 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 COL5A1-AS1Q5SY13 56 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 LYPD6Q86Y78 171 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 C9orf106Q8NAJ2 232 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 NAA60Q9H7X0 242 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 TAS2R8Q9NYW2 309 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 METTL1Q9UBP6 276 aaKnown RBP2.85□□□□□ -1.95
C11orf54-213ENST00000533585 HHLA3Q9XRX5 114 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 TPRKBQ9Y3C4 175 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 HSPE1-MOB4S4R3N1 261 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 LAMC3Q9Y6N6 1575 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 ZNF407Q9C0G0 2248 aa2.85□□□□□ -1.95
C11orf54-213ENST00000533585 TRPM3Q9HCF6 1732 aaPredicted RBP2.85□□□□□ -1.95
C11orf54-213ENST00000533585 PLXNB1O43157 2135 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 A2ML1A8K2U0 1454 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 CABIN1Q9Y6J0 2220 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 DNMBPQ6XZF7 1577 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 PNMA8CA0A1B0GUJ8 204 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 KLF7O75840 302 aaPredicted RBP2.84□□□□□ -1.95
C11orf54-213ENST00000533585 IGKV3-15P01624 115 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 PMP2P02689 132 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 CD3DP04234 171 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 SHBGP04278 402 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 CD2P06729 351 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 CD14P08571 375 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 SLC25A4P12235 298 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 ZNF14P17017 642 aaPredicted RBP2.84□□□□□ -1.95
C11orf54-213ENST00000533585 S100A10P60903 97 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 CATR1Q13166 79 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.95
C11orf54-213ENST00000533585 ESRGQ1W209 222 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 MRPL54Q6P161 138 aaKnown RBP2.84□□□□□ -1.95
C11orf54-213ENST00000533585 Q6P435 159 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 Q6ZUT4 128 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 C10orf111Q8N326 155 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 CLEC2BQ92478 149 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 RPS10P5Q9NQ39 176 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 RPRMQ9NS64 109 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 FAIMQ9NVQ4 179 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 TAS2R4Q9NYW5 299 aa2.84□□□□□ -1.95
C11orf54-213ENST00000533585 LY96Q9Y6Y9 160 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms