RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 FAM223AQ8IWN6 122 aa8.44□□□□□ -1.06
SPIDR-222ENST00000524006 HIST3H2BBQ8N257 126 aa8.44□□□□□ -1.06
SPIDR-222ENST00000524006 LINC01356Q8N9X3 169 aa8.44□□□□□ -1.06
SPIDR-222ENST00000524006 RPP21Q9H633 154 aaKnown RBP8.44□□□□□ -1.06
SPIDR-222ENST00000524006 HIF1ANQ9NWT6 349 aa8.44□□□□□ -1.06
SPIDR-222ENST00000524006 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
SPIDR-222ENST00000524006 NAT8BQ9UHF3 227 aa8.44□□□□□ -1.06
SPIDR-222ENST00000524006 J3QLI3 93 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 TRGV3P03979 118 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 CBLN1P23435 193 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 OR10D4PQ8NGN7 298 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 ZNF502Q8TBZ5 544 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 TMEM18Q96B42 140 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 METTL26Q96S19 204 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 FOXC2Q99958 501 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 ZNF492Q9P255 531 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 ZANQ9Y493 2812 aa8.43□□□□□ -1.06
SPIDR-222ENST00000524006 SMIM27A0A1W2PRY6 76 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 FBLL1A6NHQ2 334 aaKnown RBP8.42□□□□□ -1.06
SPIDR-222ENST00000524006 SH2D7A6NKC9 451 aaPredicted RBP8.42□□□□□ -1.06
SPIDR-222ENST00000524006 ZNF785A8K8V0 405 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 A8MWL6 223 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 SPINK4O60575 86 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 LTAP01374 205 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 IGLC2P0DOY2 106 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 IGHV4-38-2P0DP08 117 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 EGR2P11161 476 aaPredicted RBP8.42□□□□□ -1.06
SPIDR-222ENST00000524006 PAX1P15863 534 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 ADMP35318 185 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 TPPP2P59282 170 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 RPL15P61313 204 aaKnown RBP8.42□□□□□ -1.06
SPIDR-222ENST00000524006 S100A12P80511 92 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 MRPL54Q6P161 138 aaKnown RBP8.42□□□□□ -1.06
SPIDR-222ENST00000524006 RASL11AQ6T310 242 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 CLEC19AQ6UXS0 136 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 OR4B1Q8NGF8 309 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 BORCS7Q96B45 105 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 AJUBAQ96IF1 538 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 LINC00479Q96M42 142 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 PACRGQ96M98 296 aaPredicted RBP8.42□□□□□ -1.06
SPIDR-222ENST00000524006 MS4A10Q96PG2 267 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 NDFIP1Q9BT67 221 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 GNB1LQ9BYB4 327 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 GPR61Q9BZJ8 451 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 MEGF9Q9H1U4 602 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 BEX4Q9NWD9 120 aaPredicted RBP8.42□□□□□ -1.06
SPIDR-222ENST00000524006 KLF12Q9Y4X4 402 aa8.42□□□□□ -1.06
SPIDR-222ENST00000524006 CR1P17927 2039 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 TRBV6-1A0A0K0K1D8 114 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 G3V318 75 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 H3BUA1 57 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 CRISP2P16562 243 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 BAGE3Q86Y29 109 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 SGK494Q96LW2 274 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 ZFP30Q9Y2G7 519 aa8.41□□□□□ -1.06
SPIDR-222ENST00000524006 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.41□□□□□ -1.064e-7■■■■□ 26.6
SPIDR-222ENST00000524006 CTSGP08311 255 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 ARL3P36405 182 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 SLC35B1P78383 322 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 CT83Q5H943 113 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 GFI1BQ5VTD9 330 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 SIGLEC15Q6ZMC9 328 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 NUDT10Q8NFP7 164 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 NUDT11Q96G61 164 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 ZNF414Q96IQ9 312 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 ATP6V0BQ99437 205 aa8.4□□□□□ -1.06
SPIDR-222ENST00000524006 SOX21Q9Y651 276 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-222ENST00000524006 TLN2Q9Y4G6 2542 aa8.4□□□□□ -1.07
SPIDR-222ENST00000524006 IGHV3-35A0A0C4DH35 117 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 A6NDX4 124 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-222ENST00000524006 PHOX2AO14813 284 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 ZNF253O75346 499 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 CA1P00915 261 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-222ENST00000524006 APCSP02743 223 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 CLEC3BP05452 202 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 PF4V1P10720 104 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 PSG3Q16557 428 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 COA6Q5JTJ3 125 aaKnown RBP8.39□□□□□ -1.07
SPIDR-222ENST00000524006 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 CIARTQ8N365 385 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-222ENST00000524006 OR5R1Q8NH85 324 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 PSG8Q9UQ74 426 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 ABCA1O95477 2261 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 STAB1Q9NY15 2570 aa8.39□□□□□ -1.07
SPIDR-222ENST00000524006 COL6A5A8TX70 2615 aa8.38□□□□□ -1.07
SPIDR-222ENST00000524006 ATRQ13535 2644 aa8.38□□□□□ -1.07
SPIDR-222ENST00000524006 FN1P02751 2386 aaKnown RBP8.38□□□□□ -1.07
SPIDR-222ENST00000524006 DIRC3C9JPN6 131 aa8.38□□□□□ -1.07
SPIDR-222ENST00000524006 CHEK1O14757 476 aa8.38□□□□□ -1.07
SPIDR-222ENST00000524006 TGFAP01135 160 aa8.38□□□□□ -1.07
SPIDR-222ENST00000524006 CRIP2P52943 208 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-222ENST00000524006 HBBP68871 147 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms