RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 NUMA1Q14980 2115 aa1.87□□□□□ -2.11
SQLE-204ENST00000520493 XIRP1Q702N8 1843 aaKnown RBP1.87□□□□□ -2.11
SQLE-204ENST00000520493 ARHGEF10O15013 1369 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 ANKRD31Q8N7Z5 1873 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 GLI3P10071 1580 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 NCOR1O75376 2440 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 TRAV36DV7A0A075B6V5 113 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 GABARAPH6UMI1 98 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 DEGS1O15121 323 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 ARPC5O15511 151 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 TIMM17BO60830 172 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 RPL35P42766 123 aaKnown RBP1.86□□□□□ -2.11
SQLE-204ENST00000520493 HBBP68871 147 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 ELOBQ15370 118 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 TMEM155Q4W5P6 130 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 PATE2Q6UY27 113 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 C7orf65Q6ZTY9 151 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 SPACA4Q8TDM5 124 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 TXNDC17Q9BRA2 123 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 CST9LQ9H4G1 147 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 PKD1L1Q8TDX9 2849 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 SCN8AQ9UQD0 1980 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 TAF1LQ8IZX4 1826 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 SPG11Q96JI7 2443 aa1.86□□□□□ -2.11
SQLE-204ENST00000520493 CFAP54Q96N23 3096 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 TPRP12270 2363 aaKnown RBP1.85□□□□□ -2.11
SQLE-204ENST00000520493 VIRMAQ69YN4 1812 aaKnown RBP1.85□□□□□ -2.11
SQLE-204ENST00000520493 TRBV7-6A0A0J9YX20 115 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 ODAMA1E959 279 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 F8W036 122 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 J3QRE1 110 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 ZNF737O75373 536 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 PROSCO94903 275 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 HMGN1P05114 100 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 P0DMU3 169 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 FAM231AP0DMU4 169 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 FAM231CP0DMU5 169 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 GPX2P18283 190 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 NDUFA6P56556 154 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 OR8B8Q15620 311 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 MSMO1Q15800 293 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 DEFB115Q30KQ5 88 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 CCDC153Q494R4 210 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 HRCT1Q6UXD1 115 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 TMEM229BQ8NBD8 167 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 OR5D16Q8NGK9 328 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 ZCCHC13Q8WW36 166 aaKnown RBP1.85□□□□□ -2.11
SQLE-204ENST00000520493 SLC50A1Q9BRV3 221 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 CACYBPQ9HB71 228 aaKnown RBP1.85□□□□□ -2.11
SQLE-204ENST00000520493 C14orf132Q9NPU4 83 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 RASL12Q9NYN1 266 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 CDK12Q9NYV4 1490 aaPredicted RBP1.85□□□□□ -2.11
SQLE-204ENST00000520493 SPEGQ15772 3267 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 STRCP1A6NGW2 1772 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 N4BP2Q86UW6 1770 aaPredicted RBP1.85□□□□□ -2.11
SQLE-204ENST00000520493 MUC6Q6W4X9 2439 aa1.85□□□□□ -2.11
SQLE-204ENST00000520493 PXDNLA1KZ92 1463 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 HYDINQ4G0P3 5121 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 FAM208BQ5VWN6 2430 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 IGHV1-58A0A0C4DH39 117 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 DBIP07108 87 aaKnown RBP1.84□□□□□ -2.11
SQLE-204ENST00000520493 ZNF705BP0CI00 300 aaPredicted RBP1.84□□□□□ -2.11
SQLE-204ENST00000520493 SDC2P34741 201 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 ZNF846Q147U1 533 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 ZNF418Q8TF45 676 aaPredicted RBP1.84□□□□□ -2.11
SQLE-204ENST00000520493 ZNF714Q96N38 554 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 LXNQ9BS40 222 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 TRAPPC2LQ9UL33 140 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 DCAF1Q9Y4B6 1507 aa1.84□□□□□ -2.11
SQLE-204ENST00000520493 C5orf42Q9H799 3197 aa1.84□□□□□ -2.12
SQLE-204ENST00000520493 MAP1BP46821 2468 aaKnown RBP1.84□□□□□ -2.12
SQLE-204ENST00000520493 MDC1Q14676 2089 aaKnown RBP1.84□□□□□ -2.12
SQLE-204ENST00000520493 CNOT1A5YKK6 2376 aaKnown RBP1.84□□□□□ -2.12
SQLE-204ENST00000520493 RTL9Q8NET4 1388 aa1.84□□□□□ -2.12
SQLE-204ENST00000520493 ASPMQ8IZT6 3477 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 MYH10P35580 1976 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 TRAV1-1A0A0B4J248 108 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 OR1I1O60431 355 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 LYZL6O75951 148 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 UBL3O95164 117 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 MGST1P10620 155 aaKnown RBP1.83□□□□□ -2.12
SQLE-204ENST00000520493 Q1T7F1 81 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 KRTAP13-1Q8IUC0 172 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 LINC00301Q8NCQ3 95 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 LZICQ8WZA0 190 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 BORCS5Q969J3 196 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 MCEEQ96PE7 176 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 GSKIPQ9P0R6 139 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 LY96Q9Y6Y9 160 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 BRCA2P51587 3418 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 EP400Q96L91 3159 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 CSMD1Q96PZ7 3565 aa1.83□□□□□ -2.12
SQLE-204ENST00000520493 A2MP01023 1474 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 SHANK2Q9UPX8 1470 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 TMEM189A5PLL7 270 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 C17orf112F2Z3M2 114 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 K7ERJ3 54 aa1.82□□□□□ -2.12
SQLE-204ENST00000520493 M0QZK8 103 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms