RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 TAX1BP3O14907 124 aa13.05□□□□□ -0.32
PCDHGA11-202ENST00000518882 IL4P05112 153 aa13.05□□□□□ -0.32
PCDHGA11-202ENST00000518882 FOXE3Q13461 319 aa13.05□□□□□ -0.32
PCDHGA11-202ENST00000518882 PRR30Q53SZ7 412 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-202ENST00000518882 KLF17Q5JT82 389 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-202ENST00000518882 C8orf49Q96NF6 230 aa13.05□□□□□ -0.32
PCDHGA11-202ENST00000518882 HSPB8Q9UJY1 196 aa13.05□□□□□ -0.32
PCDHGA11-202ENST00000518882 MUC21A0A0G2JKD1 596 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 MUC21A0A140T8X8 626 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 HSBP1L1C9JCN9 74 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 TIMM23O14925 209 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 NCR2O95944 276 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 FAM106CPP0CH98 169 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 APOBEC3AP31941 199 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 RIGQ13278 110 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 FAM106AQ4KMX7 169 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 MUC21Q5SSG8 566 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 LINC01545Q5VT33 79 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 ZNF414Q96IQ9 312 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 AP5S1Q9NUS5 200 aa13.04□□□□□ -0.32
PCDHGA11-202ENST00000518882 FCGR2BP31994 310 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA11-202ENST00000518882 RBX1P62877 108 aa13.03□□□□□ -0.32
PCDHGA11-202ENST00000518882 ZNF747Q9BV97 191 aa13.03□□□□□ -0.32
PCDHGA11-202ENST00000518882 A0A087X0K7 114 aa13.02□□□□□ -0.32
PCDHGA11-202ENST00000518882 ABCA4P78363 2273 aa13.02□□□□□ -0.32
PCDHGA11-202ENST00000518882 A0A096LNJ9 63 aa13.02□□□□□ -0.33
PCDHGA11-202ENST00000518882 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA11-202ENST00000518882 B9A039 149 aa13.02□□□□□ -0.33
PCDHGA11-202ENST00000518882 LOXL1Q08397 574 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA11-202ENST00000518882 ONECUT1Q9UBC0 465 aa13.02□□□□□ -0.33
PCDHGA11-202ENST00000518882 K7EP13 123 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 PCP4P48539 62 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 VAMP3Q15836 100 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 LYPD1Q8N2G4 141 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 WI2-2373I1.2A0A1W2PRP0 233 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 OR2T8A6NH00 312 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 K7EQM0 130 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 DEFB125Q8N687 156 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 OR4C5Q8NGB2 326 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 PRSS3P2Q8NHM4 247 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 RNF5Q99942 180 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 SRSF8Q9BRL6 282 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 MS4A6AQ9H2W1 248 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 RNF24Q9Y225 148 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 SVEP1Q4LDE5 3571 aa13.01□□□□□ -0.33
PCDHGA11-202ENST00000518882 TLN1Q9Y490 2541 aaKnown RBP13□□□□□ -0.33
PCDHGA11-202ENST00000518882 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 TMEM213A2RRL7 107 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 ARF6P62330 175 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 FA2HQ7L5A8 372 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 HILPDAQ9Y5L2 63 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 A0A1W2PRD5 423 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 A0A1W2PRF3 423 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 A0A1W2PRM7 423 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
PCDHGA11-202ENST00000518882 TRAV30A0A087WSZ9 112 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 A0A1B0GW15 77 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 D6R8Y8 96 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 NBR2O15453 112 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 SNAI2O43623 268 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 CD3EP07766 207 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 LYZL1Q6UWQ5 148 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 C12orf54Q6X4T0 127 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 OR10AG1Q8NH19 301 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 LOC389332A0A1B0GUA5 103 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 RHOGP84095 191 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 CFHR4Q92496 578 aa12.99□□□□□ -0.33
PCDHGA11-202ENST00000518882 ANKHD1Q8IWZ3 2542 aaKnown RBP12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 SERTM2A0A1B0GWG4 89 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 CBY3A6NI87 242 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 F8W735 103 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 COX8AP10176 69 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 CSN1S1P47710 185 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 Q6AWC8 147 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 AMN1Q8IY45 258 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 LINC01560Q8TB33 94 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 SIGLEC8Q9NYZ4 499 aa12.98□□□□□ -0.33
PCDHGA11-202ENST00000518882 LY6HO94772 140 aa12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 KLRD1Q13241 179 aa12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 HRNRQ86YZ3 2850 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 IGKV2-40A0A087WW87 121 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 GNG7O60262 68 aa12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 SH2D1AO60880 128 aa12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 IGKV2D-40P01614 121 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 CT45A10P0DMU9 189 aa12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 FXYD7P58549 80 aa12.97□□□□□ -0.33
PCDHGA11-202ENST00000518882 GPR183P32249 361 aa12.96□□□□□ -0.33
PCDHGA11-202ENST00000518882 ZNF672Q499Z4 452 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA11-202ENST00000518882 LY6G5BQ8NDX9 201 aa12.96□□□□□ -0.33
PCDHGA11-202ENST00000518882 OR8A1Q8NGG7 326 aa12.96□□□□□ -0.33
PCDHGA11-202ENST00000518882 TMEM189A5PLL7 270 aa12.96□□□□□ -0.34
PCDHGA11-202ENST00000518882 NDUFA3O95167 84 aa12.96□□□□□ -0.34
PCDHGA11-202ENST00000518882 FAM104BQ5XKR9 115 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms