RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 SONP18583 2426 aaKnown RBP-0.03□□□□□ -2.41
GYPB-209ENST00000508618 BCL9O00512 1426 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 NSD1Q96L73 2696 aaPredicted RBP-0.03□□□□□ -2.41
GYPB-209ENST00000508618 TEP1Q99973 2627 aaKnown RBP-0.03□□□□□ -2.41
GYPB-209ENST00000508618 ABCA12Q86UK0 2595 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 USP9XQ93008 2570 aaPredicted RBP-0.03□□□□□ -2.41
GYPB-209ENST00000508618 C5orf67F2Z3F1 127 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 M0R233 179 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 TAX1BP3O14907 124 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 RPS17P08708 135 aaKnown RBP-0.03□□□□□ -2.41
GYPB-209ENST00000508618 KDELR1P24390 212 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 RAB5CP51148 216 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 SPA17Q15506 151 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 KRTAP19-6Q3LI70 58 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 AKIRIN2Q53H80 203 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 EIF5AL1Q6IS14 154 aaKnown RBP-0.03□□□□□ -2.41
GYPB-209ENST00000508618 LINC00299Q6ZSB3 139 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 OR8J2Q8NGG1 315 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 OR5D16Q8NGK9 328 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 STAG3L4Q8TBR4 150 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 RAB37Q96AX2 223 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 PARD6GQ9BYG4 376 aaPredicted RBP-0.03□□□□□ -2.41
GYPB-209ENST00000508618 TRPM1Q7Z4N2 1603 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 DNHD1Q96M86 4753 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 PTPRDP23468 1912 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 UNC13CQ8NB66 2214 aa-0.03□□□□□ -2.41
GYPB-209ENST00000508618 PIEZO1Q92508 2521 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 CCDC144AA2RUR9 1427 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 ZGRF1Q86YA3 2104 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 MAP1AP78559 2803 aaPredicted RBP-0.04□□□□□ -2.42
GYPB-209ENST00000508618 SCN8AQ9UQD0 1980 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 NUPR2A6NF83 97 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 ATP5G3P48201 142 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 DYNLT3P51808 116 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 QRFPP83859 136 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 LIN52Q52LA3 116 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 Q6ZQY7 126 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 NPCDR1Q9BY65 106 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 WFDC10AQ9H1F0 79 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 MYO7AQ13402 2215 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 MYO5AQ9Y4I1 1855 aaKnown RBP-0.04□□□□□ -2.42
GYPB-209ENST00000508618 ACACBO00763 2458 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 NUP98P52948 1817 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 TET1Q8NFU7 2136 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 FAM208BQ5VWN6 2430 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 N4BP2Q86UW6 1770 aaPredicted RBP-0.04□□□□□ -2.42
GYPB-209ENST00000508618 UBR2Q8IWV8 1755 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 LRP2P98164 4655 aa-0.04□□□□□ -2.42
GYPB-209ENST00000508618 ZANQ9Y493 2812 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 EP300Q09472 2414 aaPredicted RBP-0.05□□□□□ -2.42
GYPB-209ENST00000508618 MGAMO43451 1857 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 FREM3P0C091 2139 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 ZDBF2Q9HCK1 2354 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 COL12A1Q99715 3063 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 A6NN06 94 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 TMEM114B3SHH9 223 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 TMEM256-PLSCR3K7ERE1 68 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 LYPLA2O95372 231 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 IGLV1-51P01701 117 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 IGHV3-33P01772 117 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 KRTAP20-2Q3LI61 65 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 C1orf134Q5TEV5 83 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 PATE2Q6UY27 113 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 GOLT1AQ6ZVE7 132 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 OR10X1Q8NGY0 326 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 POP5Q969H6 163 aaKnown RBP-0.05□□□□□ -2.42
GYPB-209ENST00000508618 HYLS1Q96M11 299 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 PRAP1Q96NZ9 151 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 SIGMAR1Q99720 223 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 UCK1Q9HA47 277 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 ARL5AQ9Y689 179 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 BPTFQ12830 3046 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 LRP1BQ9NZR2 4599 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 MEGF8Q7Z7M0 2845 aa-0.05□□□□□ -2.42
GYPB-209ENST00000508618 JMJD1CQ15652 2540 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 TNRC18O15417 2968 aaPredicted RBP-0.06□□□□□ -2.42
GYPB-209ENST00000508618 TNXBP22105 4242 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 TRAV5A0A0B4J249 113 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 ZNF727A8MUV8 499 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 B4DSR2 109 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 IFNA4P05014 189 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 SPRR2EP22531 72 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 SPRR2BP35325 72 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 SPRR2AP35326 72 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 CDKN2CP42773 168 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 C10orf99Q6UWK7 81 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 PRR15Q8IV56 129 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 BOKQ9UMX3 212 aaPredicted RBP-0.06□□□□□ -2.42
GYPB-209ENST00000508618 PTPRZ1P23471 2315 aaPredicted RBP-0.06□□□□□ -2.42
GYPB-209ENST00000508618 FAT1Q14517 4588 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
GYPB-209ENST00000508618 SETD2Q9BYW2 2564 aaPredicted RBP-0.06□□□□□ -2.42
GYPB-209ENST00000508618 DOPEY1Q5JWR5 2465 aa-0.07□□□□□ -2.42
GYPB-209ENST00000508618 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
GYPB-209ENST00000508618 hDV103S1A0JD37 113 aa-0.07□□□□□ -2.42
GYPB-209ENST00000508618 CD14P08571 375 aa-0.07□□□□□ -2.42
GYPB-209ENST00000508618 CYBAP13498 195 aa-0.07□□□□□ -2.42
GYPB-209ENST00000508618 SPRR2DP22532 72 aa-0.07□□□□□ -2.42
GYPB-209ENST00000508618 DEFA3P59666 94 aa-0.07□□□□□ -2.42
GYPB-209ENST00000508618 HSPE1P61604 102 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms