RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
VPS52-218ENST00000482399 HIST1H1AQ02539 215 aaPredicted RBP10.16□□□□□ -0.78
VPS52-218ENST00000482399 GTF2H5Q6ZYL4 71 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 C8orf49Q96NF6 230 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 LOXL1Q08397 574 aaPredicted RBP10.15□□□□□ -0.78
VPS52-218ENST00000482399 PET117Q6UWS5 81 aa10.15□□□□□ -0.78
VPS52-218ENST00000482399 ZNF833PQ6ZTB9 187 aa10.15□□□□□ -0.78
VPS52-218ENST00000482399 ZNF414Q96IQ9 312 aa10.15□□□□□ -0.78
VPS52-218ENST00000482399 HIF1ANQ9NWT6 349 aa10.15□□□□□ -0.78
VPS52-218ENST00000482399 UFC1Q9Y3C8 167 aa10.15□□□□□ -0.78
VPS52-218ENST00000482399 ZNF883P0CG24 379 aa10.15□□□□□ -0.78
VPS52-218ENST00000482399 LYZL1Q6UWQ5 148 aa10.15□□□□□ -0.78
VPS52-218ENST00000482399 A1L4Q6 167 aa10.15□□□□□ -0.79
VPS52-218ENST00000482399 A6NDN8 102 aa10.15□□□□□ -0.79
VPS52-218ENST00000482399 KLF5Q13887 457 aaPredicted RBP10.15□□□□□ -0.79
VPS52-218ENST00000482399 WIPF2Q8TF74 440 aaPredicted RBP10.15□□□□□ -0.79
VPS52-218ENST00000482399 TTTY13Q9BZ97 58 aa10.15□□□□□ -0.79
VPS52-218ENST00000482399 LGALS7P47929 136 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 ADIPOQQ15848 244 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 GFRALQ6UXV0 394 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 KLK15Q9H2R5 256 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 NGBQ9NPG2 151 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 FAM215AQ9Y5M1 114 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 K7EM74 188 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 ITGB1BP1O14713 200 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 FAM120AOSQ5T036 256 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 DEFB104AQ8WTQ1 72 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 OTORQ9NRC9 128 aa10.14□□□□□ -0.79
VPS52-218ENST00000482399 ZNF785A8K8V0 405 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 SCGB2A2Q13296 93 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 TMEM75Q8N9X5 138 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 CR1LQ2VPA4 569 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 RABAC1Q9UI14 185 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 DOPEY2Q9Y3R5 2298 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 IGHV1-8P0DP01 117 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 PLP1P60201 277 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 FOXE3Q13461 319 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 SIGLEC9Q9Y336 463 aa10.13□□□□□ -0.79
VPS52-218ENST00000482399 IGLV3-9A0A075B6K5 115 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 PSMB11A5LHX3 300 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 MEF2CQ06413 473 aaPredicted RBP10.12□□□□□ -0.79
VPS52-218ENST00000482399 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 MTURNQ8N3F0 131 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 DEFB125Q8N687 156 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 SPCS1Q9Y6A9 102 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 IGKV3-7A0A075B6H7 116 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 TMEM178BH3BS89 294 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 CDKN1BP46527 198 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 KIR3DS1Q14943 382 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 RNF125Q96EQ8 232 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 TNRC6BQ9UPQ9 1833 aaKnown RBP10.12□□□□□ -0.79
VPS52-218ENST00000482399 PPIAL4CA0A0B4J2A2 164 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 MBD3L4A6NDZ8 208 aaPredicted RBP10.12□□□□□ -0.79
VPS52-218ENST00000482399 MBD3L3A6NE82 208 aaPredicted RBP10.12□□□□□ -0.79
VPS52-218ENST00000482399 MBD3L5A6NJ08 208 aaPredicted RBP10.12□□□□□ -0.79
VPS52-218ENST00000482399 FAM90A27PA6NNH2 459 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 LTAP01374 205 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 PPIAL4GP0DN37 164 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 PCP2Q8IVA1 136 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 ORMDL3Q8N138 153 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 MBD3L2Q8NHZ7 208 aaPredicted RBP10.12□□□□□ -0.79
VPS52-218ENST00000482399 NEU4Q8WWR8 484 aaPredicted RBP10.12□□□□□ -0.79
VPS52-218ENST00000482399 TRGV9Q99603 122 aa10.12□□□□□ -0.79
VPS52-218ENST00000482399 K7EP13 123 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 ZNF207O43670 478 aaKnown RBP10.11□□□□□ -0.79
VPS52-218ENST00000482399 CD5LO43866 347 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 GP9P14770 177 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 RHOGP84095 191 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 OR2K2Q8NGT1 345 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 TMEM160Q9NX00 188 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 SOX21Q9Y651 276 aaPredicted RBP10.11□□□□□ -0.79
VPS52-218ENST00000482399 TIMM23O14925 209 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 PRSS33Q8NF86 280 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 ZNF747Q9BV97 191 aa10.11□□□□□ -0.79
VPS52-218ENST00000482399 TMEM265A0A087WTH1 108 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 A0A0G2JLM5 398 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 GOSR1O95249 250 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 IFI27L1Q96BM0 104 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 MUC6Q6W4X9 2439 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 LOXP28300 417 aaPredicted RBP10.1□□□□□ -0.79
VPS52-218ENST00000482399 GATA4P43694 442 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 BCL6BQ8N143 479 aaPredicted RBP10.1□□□□□ -0.79
VPS52-218ENST00000482399 SCRT2Q9NQ03 307 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 SIGLEC8Q9NYZ4 499 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 CSPG4Q6UVK1 2322 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 IGHV1-3A0A0C4DH29 117 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 HLA-DMBP28068 263 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 LCNL1Q6ZST4 164 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 LINC01560Q8TB33 94 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 NDFIP1Q9BT67 221 aa10.1□□□□□ -0.79
VPS52-218ENST00000482399 IGLC1P0CG04 106 aa10.09□□□□□ -0.79
VPS52-218ENST00000482399 FABP2P12104 132 aa10.09□□□□□ -0.79
VPS52-218ENST00000482399 KLRD1Q13241 179 aa10.09□□□□□ -0.79
VPS52-218ENST00000482399 THAP8Q8NA92 274 aa10.09□□□□□ -0.79
VPS52-218ENST00000482399 RNASE6Q93091 150 aaKnown RBP10.09□□□□□ -0.79
VPS52-218ENST00000482399 NHP2Q9NX24 153 aaKnown RBP10.09□□□□□ -0.79
VPS52-218ENST00000482399 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
VPS52-218ENST00000482399 SORL1Q92673 2214 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms