RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 OR10G7Q8NGN6 311 aa9.69□□□□□ -0.86
TPM3-216ENST00000473036 OR1B1Q8NGR6 318 aa9.69□□□□□ -0.86
TPM3-216ENST00000473036 SCRT1Q9BWW7 348 aa9.69□□□□□ -0.86
TPM3-216ENST00000473036 TUBA4BQ9H853 241 aa9.69□□□□□ -0.86
TPM3-216ENST00000473036 DOK5Q9P104 306 aa9.69□□□□□ -0.86
TPM3-216ENST00000473036 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 ZNF98A6NK75 572 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 MEOX2P50222 304 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 SULT1A2P50226 295 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 RAB14P61106 215 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 BLOC1S1P78537 153 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 SIGLEC15Q6ZMC9 328 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 TMED6Q8WW62 240 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 SAT2Q96F10 170 aaPredicted RBP9.68□□□□□ -0.86
TPM3-216ENST00000473036 RCHY1Q96PM5 261 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 UHRF2Q96PU4 802 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 RETNQ9HD89 108 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
TPM3-216ENST00000473036 H3BRN7 92 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 DNASE2O00115 360 aaPredicted RBP9.67□□□□□ -0.86
TPM3-216ENST00000473036 SOCS3O14543 225 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 DEFB131AP59861 70 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 DEFB1P60022 68 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 SAMD13Q5VXD3 122 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 MORN5Q5VZ52 161 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 LINC00305Q7Z4B0 112 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 ZNF680Q8NEM1 530 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 TMEM37Q8WXS4 190 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 SLC25A39Q9BZJ4 359 aaPredicted RBP9.67□□□□□ -0.86
TPM3-216ENST00000473036 SH3BGRL3Q9H299 93 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 FUT9Q9Y231 359 aa9.67□□□□□ -0.86
TPM3-216ENST00000473036 HELTA6NFD8 242 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 MRPS12O15235 138 aaKnown RBP9.66□□□□□ -0.86
TPM3-216ENST00000473036 HBE1P02100 147 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 RPL7P18124 248 aaKnown RBP9.66□□□□□ -0.86
TPM3-216ENST00000473036 CDC34P49427 236 aaPredicted RBP9.66□□□□□ -0.86
TPM3-216ENST00000473036 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 KHDC3LQ587J8 217 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 FAM78BQ5VT40 261 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 PQLC2Q6ZP29 291 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 BPIFA4PQ86YQ2 179 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 SHANK2-AS3Q9BTD1 123 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 ZMAT4Q9H898 229 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 RPRMQ9NS64 109 aa9.66□□□□□ -0.86
TPM3-216ENST00000473036 CTXND1A0A1B0GTU2 59 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
TPM3-216ENST00000473036 PPT1P50897 306 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 GUK1Q16774 197 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 OR8I2Q8N0Y5 310 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 RPP25LQ8N5L8 163 aaKnown RBP9.65□□□□□ -0.86
TPM3-216ENST00000473036 SLC25A22Q9H936 323 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 NRN1Q9NPD7 142 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 RFNGQ9Y644 331 aa9.65□□□□□ -0.86
TPM3-216ENST00000473036 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
TPM3-216ENST00000473036 KNCNA6PVL3 124 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
TPM3-216ENST00000473036 CXorf1O96002 111 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 H2AFB1P0C5Y9 115 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 GALR1P47211 349 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 GCSAMLQ5JQS6 135 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 FAM213BQ8TBF2 198 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 MBD3L1Q8WWY6 194 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 CLEC5AQ9NY25 188 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 TMEM14CQ9P0S9 112 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
TPM3-216ENST00000473036 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 TRAV1-1A0A0B4J248 108 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 TRAV5A0A0B4J249 113 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 GIG44P09565 113 aaPredicted RBP9.63□□□□□ -0.87
TPM3-216ENST00000473036 TAGLN2P37802 199 aaKnown RBP9.63□□□□□ -0.87
TPM3-216ENST00000473036 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 IGFL4Q6B9Z1 124 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 FAM122CQ6P4D5 195 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 RAB24Q969Q5 203 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 SEPSECSQ9HD40 501 aaKnown RBP9.63□□□□□ -0.87
TPM3-216ENST00000473036 TMEM167BQ9NRX6 74 aa9.63□□□□□ -0.87
TPM3-216ENST00000473036 SNRPCP09234 159 aaKnown RBP9.62□□□□□ -0.87
TPM3-216ENST00000473036 STAG3L2P0CL84 134 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 STAG3L3P0CL85 134 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 PSMB3P49720 205 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 PSMG4Q5JS54 123 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 SFT2D1Q8WV19 159 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 NKX6-2Q9C056 277 aaPredicted RBP9.62□□□□□ -0.87
TPM3-216ENST00000473036 OR51M1Q9H341 326 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 HYDINQ4G0P3 5121 aa9.62□□□□□ -0.87
TPM3-216ENST00000473036 OR7C2O60412 319 aa9.61□□□□□ -0.87
TPM3-216ENST00000473036 PRB4P10163 310 aaPredicted RBP9.61□□□□□ -0.87
TPM3-216ENST00000473036 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
TPM3-216ENST00000473036 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
TPM3-216ENST00000473036 PMS2P11Q13670 270 aa9.61□□□□□ -0.87
TPM3-216ENST00000473036 SPATA31B1PQ5VZV4 182 aa9.61□□□□□ -0.87
TPM3-216ENST00000473036 TRPT1Q86TN4 253 aaKnown RBP9.61□□□□□ -0.87
TPM3-216ENST00000473036 SPATA25Q9BR10 227 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms