RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 CFHR2P36980 270 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 CACNG7P62955 275 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 Q8N976 141 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 CACNG8Q8WXS5 425 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 GRAMD2BQ96HH9 432 aa8.64□□□□□ -1.03
CHD3-208ENST00000470531 DSCAMO60469 2012 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 CEP192Q8TEP8 1941 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 TRAV9-2A0A087WT02 112 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 B5MCH6 92 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 CD3EP07766 207 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 C12orf54Q6X4T0 127 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 ZNF479Q96JC4 524 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 TCRBV4S1A1TA0A5B7 111 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 RIGQ13278 110 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 GLMPQ8WWB7 406 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 TMEM14BQ9NUH8 114 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 HLA-DRB1P01911 266 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 OSR1Q8TAX0 266 aaPredicted RBP8.63□□□□□ -1.03
CHD3-208ENST00000470531 ANAPC13Q9BS18 74 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 TMEM160Q9NX00 188 aa8.63□□□□□ -1.03
CHD3-208ENST00000470531 TMEM213A2RRL7 107 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 H0YJW9 148 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 TOMM40O96008 361 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 HSD52Q0P140 79 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 AMN1Q8IY45 258 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 RAB1CQ92928 201 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 TET2Q6N021 2002 aaPredicted RBP8.62□□□□□ -1.03
CHD3-208ENST00000470531 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 F5H697 171 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 TIMM23O14925 209 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 MGPP08493 103 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 PPP1R27Q86WC6 154 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 SLC25A2Q9BXI2 301 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 HSPB8Q9UJY1 196 aa8.62□□□□□ -1.03
CHD3-208ENST00000470531 GPR183P32249 361 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 ZNF329Q86UD4 541 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 TMEM133Q9H2Q1 129 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 TNRC6AQ8NDV7 1962 aaKnown RBP8.61□□□□□ -1.03
CHD3-208ENST00000470531 H7C2G1 150 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 CCL21O00585 134 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 SIVA1O15304 175 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 ID1P41134 155 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
CHD3-208ENST00000470531 D6R8Y8 96 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 SRD5A1P18405 259 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 IFI27P40305 119 aaPredicted RBP8.6□□□□□ -1.03
CHD3-208ENST00000470531 CTRLP40313 264 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 LGALS7P47929 136 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 ANXA2RQ3ZCQ2 193 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 NDFIP1Q9BT67 221 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 SCNM1Q9BWG6 230 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 TRBV9A0A0B4J1U6 114 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 C9JCJ5 164 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 RBPMS2Q6ZRY4 209 aaKnown RBP8.6□□□□□ -1.03
CHD3-208ENST00000470531 Q71RC1 249 aaPredicted RBP8.6□□□□□ -1.03
CHD3-208ENST00000470531 LRBAP50851 2863 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 ADAMTS20P59510 1910 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 LRRK2Q5S007 2527 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 APOBEC3AP31941 199 aaPredicted RBP8.6□□□□□ -1.03
CHD3-208ENST00000470531 PRR20EP86478 221 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 PRR20CP86479 221 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 PRR20DP86480 221 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 PRR20BP86481 221 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 PRR20AP86496 221 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 ADIPOQQ15848 244 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 PRELID3AQ96N28 172 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 YAE1D1Q9NRH1 226 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 MTORP42345 2549 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 ABCA12Q86UK0 2595 aa8.6□□□□□ -1.03
CHD3-208ENST00000470531 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.59□□□□□ -1.03
CHD3-208ENST00000470531 M0R381 172 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 TCRAP04437 139 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 HLA-DMBP28068 263 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 Q0VG73 95 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 SPANXN1Q5VSR9 72 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 OR2K2Q8NGT1 345 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 ZNF503Q96F45 646 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 HIVEP2P31629 2446 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 P0C879 139 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 LY6EQ16553 131 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 COX19Q49B96 90 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 SLC25A48Q6ZT89 311 aaKnown RBP8.59□□□□□ -1.03
CHD3-208ENST00000470531 OR10AG1Q8NH19 301 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 SFXN3Q9BWM7 321 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 MRPL32Q9BYC8 188 aaKnown RBP8.59□□□□□ -1.03
CHD3-208ENST00000470531 NDPQ00604 133 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 PATE2Q6UY27 113 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 LINC00322Q6ZN03 302 aaPredicted RBP8.59□□□□□ -1.03
CHD3-208ENST00000470531 ZNF502Q8TBZ5 544 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 DKK4Q9UBT3 224 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 RELNP78509 3460 aa8.59□□□□□ -1.03
CHD3-208ENST00000470531 NAV2Q8IVL1 2488 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms