RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 C5orf17Q8NAS9 161 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 OR10W1Q8NGF6 305 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 TMEM167AQ8TBQ9 72 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 RNF24Q9Y225 148 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 ROS1P08922 2347 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 JMJD1CQ15652 2540 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.64□□□□□ -1.19
HDAC3-205ENST00000469550 TRAV8-6A0A0B4J262 113 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 PGPA6NDG6 321 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 CD3EP07766 207 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 C16orf54Q6UWD8 224 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 LINC00322Q6ZN03 302 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-205ENST00000469550 LINC00305Q7Z4B0 112 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 MOGAT3Q86VF5 341 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 VSTM2AQ8TAG5 236 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 NEU4Q8WWR8 484 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-205ENST00000469550 NPIPB3Q92617 1050 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 DAZAP1Q96EP5 407 aaKnown RBP7.64□□□□□ -1.19
HDAC3-205ENST00000469550 PGLYRP4Q96LB8 373 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 FNDC4Q9H6D8 234 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-205ENST00000469550 TP73-AS1Q9UF72 201 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 PRR14LQ5THK1 2151 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 ZANQ9Y493 2812 aa7.64□□□□□ -1.19
HDAC3-205ENST00000469550 CSPG4Q6UVK1 2322 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 TRBV6-1A0A0K0K1D8 114 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 CHEK1O14757 476 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 APOA2P02652 100 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 APOHP02749 345 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-205ENST00000469550 NBEAP1P0C6P0 100 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 ARF6P62330 175 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 SSBP2P81877 361 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-205ENST00000469550 ZNF672Q499Z4 452 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-205ENST00000469550 TMEM97Q5BJF2 176 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 PVRIGQ6DKI7 326 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 UFSP1Q6NVU6 142 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 C2orf91Q6ZV80 131 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 BPIFA4PQ86YQ2 179 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 OR5AN1Q8NGI8 311 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 ITLN1Q8WWA0 313 aa7.63□□□□□ -1.19
HDAC3-205ENST00000469550 A0A087X0K7 114 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 A0A1B0GW15 77 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 C7orf71A4D174 169 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 TCRAP04437 139 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 CRYGCP07315 174 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 CEACAM3P40198 252 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 WT1-ASQ06250 92 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 GTF2H5Q6ZYL4 71 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 DTX2Q86UW9 622 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 GAGE10A6NGK3 116 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 C22orf46C9J442 243 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 H3BRM9 83 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 MSMPQ1L6U9 139 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 BHLHA15Q7RTS1 189 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-205ENST00000469550 ERASQ7Z444 233 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 OR1N2Q8NGR9 330 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 HARBI1Q96MB7 349 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 TRGV9Q99603 122 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 ZNF747Q9BV97 191 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 RNF7Q9UBF6 113 aa7.62□□□□□ -1.19
HDAC3-205ENST00000469550 C9orf118A6NHY6 69 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 CGB1A6NKQ9 187 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 RNF223E7ERA6 249 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 SIVA1O15304 175 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 IGHV4-39P01824 125 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 HTR1DP28221 377 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 CSN1S1P47710 185 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 PLP1P60201 277 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 BSPH1Q075Z2 132 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 ZNF788Q6ZQV5 615 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 OR10X1Q8NGY0 326 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 FLYWCH2Q96CP2 140 aaKnown RBP7.61□□□□□ -1.19
HDAC3-205ENST00000469550 GAFA1Q96PS6 74 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 AP5S1Q9NUS5 200 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 SLC25A15Q9Y619 301 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 DSCAML1Q8TD84 2053 aa7.61□□□□□ -1.19
HDAC3-205ENST00000469550 IGLV3-9A0A075B6K5 115 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 hADV38S2A0JD32 116 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 A6NDN8 102 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 SHISA9B4DS77 424 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 E7EUB6 86 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 GP9P14770 177 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 GLRXP35754 106 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 PAX2Q02962 417 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 RIGQ13278 110 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 C3orf36Q3SXR2 165 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 SPRNQ5BIV9 151 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 TIMM23BQ5SRD1 257 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 FER1L6-AS1Q8NA97 138 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 OR4C13Q8NGP0 309 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 OR10AG1Q8NH19 301 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 LINC00312Q9Y6C7 94 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 A0A096LNT2 108 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 A0A1B0GUT8 65 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 FGF6P10767 208 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 CD24P25063 80 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 ZNF137PP52743 207 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 TEX45Q8NA69 505 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 BLNKQ8WV28 456 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 MRPL20Q9BYC9 149 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms